Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0319 ATGATGTGTTTGATTAGATGTGCAATGTTCCTATTTTTCTTTCTAGACATTGTTCATTCTAGAGTTTATGGAGAAAACAATGCTAGTCTTGTCAATGATAAAAATGCACTTATTTCATTCATGTCATGCATTGTTTCTGACCCCAAAAATGCTTTAGAGAGTTGGAAATCACATAGTGTTCATGTTTGTGATTGGTCAGGTGTTACATGCAACAATGCAAGTGACATGATCATAGAGCTTGATCTAAGTGGAAGGTTACTAAGGGGCATTATTTCCCCTGCTCTTGCTAACATCTCTTCATTGCAAATTCTTGATCTTTCTGAGAATCATTTTGAGGGTCACATTCCTAAAGAGTTAGGCTATTTAGTTCAGCTTGAACAACTTAGTCTGTCTAAGAATTTTCTTGAAGGGCACATTCCCTCTGAGTTTGGTTCACTTCAAAACTTGTACTACCTTGACATGGGAAACAATCATCTTGAGGGAGAAATTCCACCATCACTTTTCTGCAATGTGACTTCATTGAGTTACATAGACCTATCTAATAATTCCTTAGAGGGACAAATACCCTTGAACAATGAGTGTATCCTTAAAAAACTTAGGTACCTCTTACTTTGGTCCAACCACCTTGTAGGCCATATTCCCTTAGCACTTTCAAACTCCACTGAACTTAAATGGCTCGATTTAGAGTCAAATATGTTGAATGGAGAACTGCCATCGGAGATTGTACATAATTGGCCGCGACTACAATTCCTCTACTTATCATATAATGACTTTGTTAGCCATGATAATAACACCAACCTCGAACCTTTTTTTGCTTCATTGATGAACTTATCTGACTTCGAAGAACTCGAGTTGGCCGGAAACAATATTGGTGGTAAGCTACCTCATATTATTGGTGATCTTCCTACCAGTCTGCTACAACTTCACCTACAAGAAAATCTCATATATGGTTCCATTCCCCCACAAATTGCTAATCTTGTCAATCTGACTCTCTTGAATTTGTCCAGTAACTTAATAAACGGATCAATCCCTCCCAGTTTATGCAAGATGGGTAGGCTAGAGAGAATTTATTTGTCAAATAATTCACTATGTGGTGAGATTCCTTCAGCCCTTGGTGGCATCAAGCATCTCGGTCTTCTTGACTTGTCAATAAACAAGCTTTCAGGTACAATACCAGATAGTTTTGCTAACCTCCCACAGTTAAGAAAGCTTTTACTTTATGACAACCAACTTTCTGGACCAATCCCACCGAGTCTTGGAAAATGTGTCAATTTGGAGATTTTAGACTTATCTCACAACAAGATTTCAGGGCTGATTCCTGCTGAAGTTGCAGCCTTGAGTAGCTTGAAACTATACTTGAATTTGTCAAGCAATAACCTTCATGGGCCTTTGCCATTAGAACTCAGCAAAATGAACATGGTGCTAGCTATTGATCTATCAACGAACAATCTCTCTGGCACAATCCCACCACAACTGGAAAGTTGCGTAGCGCTGGAGTACCTCAACCTTTCTGATAATTCCTTCGAAGGCCCTCTCCCTGATTCATTAGGCCAATTGCCCTATGTTAGAGCACTTGATGTGTCCTCAAATCAATTGACAGGGGTATTACCAGAGTCACTTCAGTTGTCTTCCACTCTCATCAAACTGAATTTCTCTTTCAACAAGTTCTCAGGGAAAGTCTCAAACAAGGGTACATTTTCATCTCTCACCATAGAGTCTTTCCTAGGAAACAATGATCTATGTGGCCTGGTAAAAGGCATGCAAAGCTGCCATAGGAAGCATAGCTATCATTTGGTATTGGTGTTTTCGGTGATTCCTGTGTTACTATTTGGCACTCCTCTATTATGCATGTTTAAGCACTTCATTGTAGTCAAATCAAGAGCAAGAAAGCCATTTGAAGTGGTTGGTATAGGTGACGTAGATGATGAAGAGGAAACAAAAGATCTCAAGTTCCCAAGAATTTCGTATAGACAACTTATAGAAGCCACAGGAGGCTTCACCAGTTCAAGCCTAATTGGTTCAGGCCGGTTTGGACGAGTCTACAAAGGCGTTCTCGTAGATAATACAAGAGTAGCAGTGAAGGTATTAGATACAACAACAGCTGGTGAGATTTCAAGGAGCTTTAGAAGGGAATGCCAAATCCTAAGAAGGATCAGGCACAGAAATTTAATAAGGATCATCGCAATTTGCAGTAAGCCAAAGTTTAAGGCTATTGTTCTTCCACTGATGCCAAATGGTAGCCTTGAGAAGCATCTGTATCCAAGCCTGGACCATGGATTAAGCCAAAGGTTGGATGTGGTTCAGTTGGTGAGGATTTGCAGTGACGTAGCCGAGGGAATGTCTTATTTGCACCATTACTCTCCAGTGAGAGTTGTGCATTGTGATCTTAAGCCAAGCAATATACTCCTTGATGAGGATCTAACTGCTTTGGTTACTGATTTTGGAATTTCAAGGCTTGTAAAAGGTGATGAAACTACATTCACCAGTGAGTCGGCATCTTTCAGTTCAACACATGGATTGTTATATGGCTCTGTTGGTTATATAGCTCCTGAATATGGAATGGGAAAACATGCTTCAACTCAAGGTGATGTTTACAGTTTTGGGGTACTTTTGTTAGAAATAGTGTCAGGTAAACACCCCACTGATGTACTCATCCATGAAGGCTCTAGCTTGCATGAGTGGATTAAGAGACAATACCTAAACCAACACAAACTTGAAAACATTGTTGAACAAGCATTGCAAAGGCTCTCTCCTTCTGGTGTGTCAACCCATCATAACAAGATTTGGCACAATGTTGTGCTGGAACTCATTGAGCTAGGCCTTCTCTGCACACAGCACAATGCTTCAATAAGACCAACCATGCTTGATGTGGCCCAAGAGATGGGAAGGTTGAAGGACTACCTCACTAATCCAATCTCTCAGTTCATTGAAGTTAATCCCAAGATTAATTCTTTATGCAGTGAAGATATTTTAGTTGAAAAGTAA 2985 0.3997 MMCLIRCAMFLFFFLDIVHSRVYGENNASLVNDKNALISFMSCIVSDPKNALESWKSHSVHVCDWSGVTCNNASDMIIELDLSGRLLRGIISPALANISSLQILDLSENHFEGHIPKELGYLVQLEQLSLSKNFLEGHIPSEFGSLQNLYYLDMGNNHLEGEIPPSLFCNVTSLSYIDLSNNSLEGQIPLNNECILKKLRYLLLWSNHLVGHIPLALSNSTELKWLDLESNMLNGELPSEIVHNWPRLQFLYLSYNDFVSHDNNTNLEPFFASLMNLSDFEELELAGNNIGGKLPHIIGDLPTSLLQLHLQENLIYGSIPPQIANLVNLTLLNLSSNLINGSIPPSLCKMGRLERIYLSNNSLCGEIPSALGGIKHLGLLDLSINKLSGTIPDSFANLPQLRKLLLYDNQLSGPIPPSLGKCVNLEILDLSHNKISGLIPAEVAALSSLKLYLNLSSNNLHGPLPLELSKMNMVLAIDLSTNNLSGTIPPQLESCVALEYLNLSDNSFEGPLPDSLGQLPYVRALDVSSNQLTGVLPESLQLSSTLIKLNFSFNKFSGKVSNKGTFSSLTIESFLGNNDLCGLVKGMQSCHRKHSYHLVLVFSVIPVLLFGTPLLCMFKHFIVVKSRARKPFEVVGIGDVDDEEETKDLKFPRISYRQLIEATGGFTSSSLIGSGRFGRVYKGVLVDNTRVAVKVLDTTTAGEISRSFRRECQILRRIRHRNLIRIIAICSKPKFKAIVLPLMPNGSLEKHLYPSLDHGLSQRLDVVQLVRICSDVAEGMSYLHHYSPVRVVHCDLKPSNILLDEDLTALVTDFGISRLVKGDETTFTSESASFSSTHGLLYGSVGYIAPEYGMGKHASTQGDVYSFGVLLLEIVSGKHPTDVLIHEGSSLHEWIKRQYLNQHKLENIVEQALQRLSPSGVSTHHNKIWHNVVLELIELGLLCTQHNASIRPTMLDVAQEMGRLKDYLTNPISQFIEVNPKINSLCSEDILVEK* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0319 994 ProSiteProfiles Protein kinase domain profile. 666 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0319 994 Gene3D Transferase(Phosphotransferase) domain 1 743 977 - -
Lan1g0319 994 CDD STKc_IRAK 672 964 - -
Lan1g0319 994 SMART serkin_6 666 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0319 994 SUPERFAMILY RNI-like 79 364 - -
Lan1g0319 994 Gene3D Ribonuclease Inhibitor 238 593 IPR032675 -
Lan1g0319 994 SMART LRR_typ_2 423 445 IPR003591 -
Lan1g0319 994 SMART LRR_typ_2 146 170 IPR003591 -
Lan1g0319 994 SMART LRR_typ_2 326 350 IPR003591 -
Lan1g0319 994 SMART LRR_typ_2 196 220 IPR003591 -
Lan1g0319 994 SMART LRR_typ_2 98 122 IPR003591 -
Lan1g0319 994 SMART LRR_typ_2 519 542 IPR003591 -
Lan1g0319 994 SMART LRR_typ_2 398 422 IPR003591 -
Lan1g0319 994 Gene3D Phosphorylase Kinase; domain 1 638 741 - -
Lan1g0319 994 SUPERFAMILY L domain-like 328 582 - -
Lan1g0319 994 PANTHER OS04G0122200 PROTEIN 23 965 - -
Lan1g0319 994 Gene3D Ribonuclease Inhibitor 30 195 IPR032675 -
Lan1g0319 994 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Lan1g0319 994 Pfam Leucine Rich Repeat 498 518 IPR001611 GO:0005515
Lan1g0319 994 Pfam Leucine Rich Repeat 424 442 IPR001611 GO:0005515
Lan1g0319 994 ProSiteProfiles Leucine-rich repeat profile. 424 445 IPR001611 GO:0005515
Lan1g0319 994 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Lan1g0319 994 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 23 965 - -
Lan1g0319 994 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Lan1g0319 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Lan1g0319 994 Pfam Protein tyrosine and serine/threonine kinase 670 958 IPR001245 GO:0004672|GO:0006468
Lan1g0319 994 SUPERFAMILY Protein kinase-like (PK-like) 650 959 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0319 Lan-Chr1 2326296 2330015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0319 33 913 Receptor kinase-like Gene Family AT3G47570 36.485 5.24e-159 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan1g0319 Pkinase 2.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0319 - - lang:109346572 1931.38