Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0316 ATGCACTTTGAGACAGTTCCCGCGAGTTTCTCTCATCCATTACACCAAATGTTGTTTTTTTCCCTTTCTCCATATTCTTCTTGCCGTGTCCTGATCTTGTTGGATTCAGGCATACCCACTTGTATTCCATCATCAACCGTTAGATCCATAGTTATGCAGCAAGGTGACCAAACTTTTATTAGCTTGAGGCCTGGCGGTGGTCGTAGCGGCGCCGCCGGTACCAGATTCCTTGCTCCTCGATTCGATTCATCTTTAGCTGCTATCCCTGCTTTCGGTTCCTTTTCATCTGATCCATCACTTTCGAATGTTGCTCCTTCTATCAAGGCAGGAGACTCACTGTTTGAGAATCGTGAGCGCGTGCGATATACTAGAGAACAGCTTTTACAGCTTCGAGAGGCAACTCAGGTTGGTGAGATTCCCAATGATGTTTTAAAGATCAAACAAGATCTTGATGCGGAACTTTTTGGTGAAGATCAAAGTTGGGGCCGCTCAGAAAACAATCCTGCAAATCCATCTCAAAATCGATATACTGAGCCAAATAACAGTGACTGGCGTGGCCGATCTGGACAGCTTCCCGCTAATGCAGATGAGAGGTCTTGGGGTAATGTCAAGGAGAATAGAGACTTTGGCAATAATAATCGTCAAGATCAACTGAATTCTCAGTTTGGAAGGGGAGGACCTGCTCCTACTCTGGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAAGGGAACTCTCTCTGACAAAGATCGTGTCTTGAAGACTGTGAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAGTTGATCGAATCTGGAATTACATCAGCCGACATATTGAAGGGAGTCATTTCTCTTATTTTCGACAAGGCTGTGTTAGAGCCAACATTTTGCCCCATGTATTCTCTGTTGTGTTCTGATCTTAATGAAAAGTTGCCTCCATTCCCATCTGACGAACCTGGTGGGAAAGAAATCACTTTTAAGAGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATGAACTGAGGGAAGAACTGAGGCAGATGACTGCCCCGGAGCAGGAGATGAAGCGACGAGACAAGGAAAGACTTGTCAAGATTCGTACACTTGGAAATATCCGTTTGATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAGGATTGTCCATCACATTGTTCAGGAGCTTTTAGGAACTCCTGACAGCAAGGACTGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCATTTTTTCAACACTATTGGTAAGCAGCTTGATGAAGTCCCAAAATCACGACGTATAAATGATATGTACTTTAGTCGGTTGAATGAATTGGCCTCAAATCCCCAACTTGTACCACGGCTGAGGTTCATGGTTCGTGATGTTATAGACTTGCGTGCGAATAACTGGATTCCAAGACGCGAAGAGGTGAAAGCCAAAACAATCACTGAAATTCATTCCGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAATATGAGAAATATCCGTGTAACTTCTGGTGTTCATGGAAGTACCGGTCCTGGGGGCTTCCCCATTGCTCGACCTGGTACTGGGGGTGTGATGCCTGGAATGCCAGGGGGCAAGAAGATACTTGGACTTGATAATGACAACTGGGAGATCCCTAGGACTAGATCAATGCCGAGAGGAGACGTGTCTGGGGCACAAAATGCTGGACATGGTCAGTCTCTTCTCTTTTCCAAGTCATCAACTGTGAATTCAAAGTTTCTACCTCAAGGCAGTGGTCTTATTAGTGGGAGAAATAGTGCCTTAGTACATGGAGGAGGTGGACCCCCTTCCGCTCTCCCATCAGACTCCTCTATTGCTACTGGGCCTGCATCTCAAATCCCTCAGGCTGTTAAACCTGTTGCTGCTGTGTCCACTGAGGTGTCACAGGCTCCTGCTGCAAAATTGAATACTGATGTTCTTCGCCGGAAAACGGTTTCTCTTCTGGAAGAATATTTCAGTGTTCGGCTGCTGGACGAGGCAGTACAATGTGTGGAGGAACTAAAATCCCCTGCTTACTATCCTGAGTTTGTGAAGGAAGCCATTTTCCTTGCACTCGACAAAAGCCCGCCATGTGTTGCACCTGTTGCCAATCTTGTTCAGCATCTGTTTATTAAGAAAATTCTTTCTGCAAGAGACATAGGGACTGGCTGCTTGTTGTTTGGTTCTATGCTGGATGATATTGGTATAGATTTACCTAAGGCGCCGAATAATTTTGGTGAAATAATCGGGAAACTGATTTTAGCCGGGGGTTTGGATTTTAAGGTGGTAAGAGAGATCCTTAAGAAGGTAGAGGATGACCGGTTCCAGAAAGCAATATTTGATACCGCAGTACAGGTAATTACCACTGCATCTGCTCAAGCTGTGCTGGATTCACAAGCATCTGATATTGAAGCTTGTCGGAGTCTGTTAAACTGA 2481 0.4514 MHFETVPASFSHPLHQMLFFSLSPYSSCRVLILLDSGIPTCIPSSTVRSIVMQQGDQTFISLRPGGGRSGAAGTRFLAPRFDSSLAAIPAFGSFSSDPSLSNVAPSIKAGDSLFENRERVRYTREQLLQLREATQVGEIPNDVLKIKQDLDAELFGEDQSWGRSENNPANPSQNRYTEPNNSDWRGRSGQLPANADERSWGNVKENRDFGNNNRQDQLNSQFGRGGPAPTLVKAEVPWSARKGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIESGITSADILKGVISLIFDKAVLEPTFCPMYSLLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADELREELRQMTAPEQEMKRRDKERLVKIRTLGNIRLIGELLKQKMVPERIVHHIVQELLGTPDSKDCPAEENVEAICHFFNTIGKQLDEVPKSRRINDMYFSRLNELASNPQLVPRLRFMVRDVIDLRANNWIPRREEVKAKTITEIHSEAEKNLGLRPGATANMRNIRVTSGVHGSTGPGGFPIARPGTGGVMPGMPGGKKILGLDNDNWEIPRTRSMPRGDVSGAQNAGHGQSLLFSKSSTVNSKFLPQGSGLISGRNSALVHGGGGPPSALPSDSSIATGPASQIPQAVKPVAAVSTEVSQAPAAKLNTDVLRRKTVSLLEEYFSVRLLDEAVQCVEELKSPAYYPEFVKEAIFLALDKSPPCVAPVANLVQHLFIKKILSARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVREILKKVEDDRFQKAIFDTAVQVITTASAQAVLDSQASDIEACRSLLN* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0316 826 MobiDBLite consensus disorder prediction 160 188 - -
Lan1g0316 826 MobiDBLite consensus disorder prediction 157 230 - -
Lan1g0316 826 Gene3D - 655 820 - -
Lan1g0316 826 ProSiteProfiles MI domain profile. 661 783 IPR003891 -
Lan1g0316 826 MobiDBLite consensus disorder prediction 606 626 - -
Lan1g0316 826 Gene3D - 243 479 - -
Lan1g0316 826 Pfam MIF4G domain 252 478 IPR003890 GO:0003723|GO:0005515
Lan1g0316 826 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 54 825 IPR045208 GO:0003743
Lan1g0316 826 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 54 825 - -
Lan1g0316 826 SUPERFAMILY ARM repeat 245 480 IPR016024 -
Lan1g0316 826 MobiDBLite consensus disorder prediction 560 580 - -
Lan1g0316 826 SUPERFAMILY ARM repeat 657 804 IPR016024 -
Lan1g0316 826 SMART ma3_7 662 774 IPR003891 -
Lan1g0316 826 Pfam MA3 domain 662 774 IPR003891 -
Lan1g0316 826 MobiDBLite consensus disorder prediction 205 224 - -
Lan1g0316 826 SMART if4_15 252 478 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0316 Lan-Chr1 2299173 2315546 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0316 52 824 Eukaryotic Initiation Factors Gene Family AT5G57870 61.083 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0316 K03260 - gmx:100781275 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0316 1 2299173 2315546 Lan1g0316 1 2299173 2315546 ECH
Lan12g1092 12 17438866 17444054 Lan1g0316 1 2299173 2315546 LSH
Lan1g1184 1 21795432 21801230 Lan1g0316 1 2299173 2315546 LSH