Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0304 ATGGGTTTTGGAGTATTTGGTTCTTTTGTTGTTTTGACACTCTTGTTCAAGCATTTGGCTTCTCAGCAACCAAACACTGATGAGTTTTTTGTGTCTGAGTTTTTGCACAAGATGGGTTTCTACAACTTCACTGCTTCTATTTGTTCATGGGAAAGGGTTTCCTGTGATGCAAATAGAGAACAAGTTTTTGAGTTAAACTTTTCTGGTATGAGCCTAACTGGTCCTATTCCTGATACCACTATAGGCAAGCTTAGCAAGCTTCAATCTTTGGATCTTAGCTTCAACAAAATCACTTCTTTGCCTTCAGATTTCTGGGGTTTGAGCTCTCTCAAGACCCTTAACCTCTCCTCCAATCAGATTTCTGATTCACTTAACAACATTGGCAACTTTGGTTTGCTAGAAACCTTTGACTTGTCTAGCAACAATTATTCTGATGAAATTCCTGAAGCTATCAGATCCCTTGTGAAACTGAGGGTCCTCAAACTTGACCACAACAGCTTTTCACAGAGAATTACTTCAGGGATTCTCAAGTGCAAGTCTCTAGTTTCAATTGATCTTTCATCAAATCAGCTTAATGGAACACTTCCAGATGGTTTTGGTGCTGCTTTTCCTAGGCTGAGGACATTGAACCTTGCTGGGAATAATATCTATGGCCGTGCTTCGGATATTTTAGGCTTAAAGTCCATTGTGACTCTCAATATGTCAGGCAATTTGTTTGAAGGTTCTGTCATTGATGTGTTTCAGGAACATCTGGAGGTCTTGGACCTTAGCAGAAACCGATTTCAAGGCCACATTCCTCAGGTACAGTACAACTCTAATTACAATTGGTCTCATTTAGTTTATCTGGACTTATCAGAGAATGAGCTTAGTGGGGAGTTTTTCCAAAATTTAAACGAGCCGCTTAATCTAAAGCACCTTAATCTTGCACACAATAGATTTAGCAGGCAGAAATTCCCAGTGGTTGAAATGTTCCCACAGTTGGATTATCTCAACTTGTCCAAAACTAGCCTTGTTGGTAACATTCCTGATGAAATCTCACAACTGAGTAATTTGAATGCACTTGATCTTAGTATGAATCATCTTACTGGAAAAGTTCCCTTGTTGAGGAATAAAGACCTCCAAATTATTGACCTTTCAAACAACAGTTTGAGTGGAGAAGTCTCTCCTTATGTCTTAGAGAAGCTCCCATTGATGGAGAAGTACAACTTCTCTTATAATAACTTAACCTTCTGTGCTTTAGAAATCAACCATGATATCATGCAAAAAGCATTCTTTGGATCAGTGAACAGTTGTCCAATTGCAGCAAATCCGATTCTTTTCAAAAGAAGAGCTACCAAACACAAGGGAATGAAGCTTGCTCTGGTATTAACCTTCTCAATGATATGCTTGCTTGCTGGGCTTTTGTTTCTAGCATTTGGTTGCAGAAGGAAGACAAGAATGTGGGAAGTTAAGCAAAGTTCTTACCGAGAAGAACAAAATATTTCGGGACCCTTCTCGTTCCAGACTGATTCAACTACCTGGGTGGCTGATGTTAAGCAGGCAACATCAGTTGCGGTAGTAATCTTTGAGAAGCCATTGCTGAGTATTACATTTGCTGATCTCTTGTCCGCAACTTCAAATTTCGATAGGGATACTCTTTTGGCAGACGGAAAATTTGGTCCTGTTTATAGAGGCTTTCTGCCTGGTGGTATTCATGTAGCTATTAAAGTTTTGGTGGTAGGGTCTACATTGACAGATCAAGAAGCTGCGAGAGAGCTGGAGTTTCTCGGTAGAATCAAACACCCCAATCTTGTCCCTTTAACAGGATATTGTGTAGCTGGGGATCAAAGGATTGCCATATATGATTATATGGAGAATGGGAACTTACAAAATCTGCTTCATGACTTGCCACTTGGTGTGCGAAGCACAGAAGATTGGAGCACGGATACTTGGGAAGAAGCTGACAACAATGGGATTCAAAATACTGGGTCTGAAGGGTTACTCACAGCTTGGACATTTCGACACAAAATAGCCCTTGGCATTGCACGAGCATTAGCGTTTTTGCATCATGGATGCTCACCTCCAATTATTCACAGAGATGTTAAGGCTAGCAGTGTTTATTTGGATTATGACTTAGAGCCAAGGTTGTCTGATTTTGGTCTAGCTAAGATTTTCGGCAGTGGCTTGGATGAGGAGATTGCACGCGGTTCGCCTGGTTATGTTCCACCAGAGTTTTCTCAACCAGAATTTCAGACCCCAACACCAAAATCAGATGTGTACTGTTTTGGTGTTGTTCTCTTTGAGCTGGTAACGGGAAAGAAGCCAGTTGAAGATGATTATCCTGATGATATGGAAGCAACTTTGGTTAGTTGGGTCAGAGGACTGGTCAGAAGGAATCAAGCTTCAATGGCTATTGATCCCAAAATTCGTGATACAGGACTGAGTGAACAAATGGAGGAGGCTCTTAAAATCGGTTATCTGTGCACGGCTGACTTGCCCTCCAAGCGACCGAGCATGCAGCAGATAGTAGGACTAATAAAGGATATTGAACCTACTGCTAATTAG 2544 0.41 MGFGVFGSFVVLTLLFKHLASQQPNTDEFFVSEFLHKMGFYNFTASICSWERVSCDANREQVFELNFSGMSLTGPIPDTTIGKLSKLQSLDLSFNKITSLPSDFWGLSSLKTLNLSSNQISDSLNNIGNFGLLETFDLSSNNYSDEIPEAIRSLVKLRVLKLDHNSFSQRITSGILKCKSLVSIDLSSNQLNGTLPDGFGAAFPRLRTLNLAGNNIYGRASDILGLKSIVTLNMSGNLFEGSVIDVFQEHLEVLDLSRNRFQGHIPQVQYNSNYNWSHLVYLDLSENELSGEFFQNLNEPLNLKHLNLAHNRFSRQKFPVVEMFPQLDYLNLSKTSLVGNIPDEISQLSNLNALDLSMNHLTGKVPLLRNKDLQIIDLSNNSLSGEVSPYVLEKLPLMEKYNFSYNNLTFCALEINHDIMQKAFFGSVNSCPIAANPILFKRRATKHKGMKLALVLTFSMICLLAGLLFLAFGCRRKTRMWEVKQSSYREEQNISGPFSFQTDSTTWVADVKQATSVAVVIFEKPLLSITFADLLSATSNFDRDTLLADGKFGPVYRGFLPGGIHVAIKVLVVGSTLTDQEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLHDLPLGVRSTEDWSTDTWEEADNNGIQNTGSEGLLTAWTFRHKIALGIARALAFLHHGCSPPIIHRDVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIARGSPGYVPPEFSQPEFQTPTPKSDVYCFGVVLFELVTGKKPVEDDYPDDMEATLVSWVRGLVRRNQASMAIDPKIRDTGLSEQMEEALKIGYLCTADLPSKRPSMQQIVGLIKDIEPTAN* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0304 847 Gene3D Ribonuclease Inhibitor 173 271 IPR032675 -
Lan1g0304 847 Gene3D Ribonuclease Inhibitor 272 419 IPR032675 -
Lan1g0304 847 Pfam Leucine rich repeat 76 120 IPR001611 GO:0005515
Lan1g0304 847 Gene3D Ribonuclease Inhibitor 31 172 IPR032675 -
Lan1g0304 847 ProSiteProfiles Protein kinase domain profile. 541 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0304 847 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 844 - -
Lan1g0304 847 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 844 - -
Lan1g0304 847 ProSiteProfiles Leucine-rich repeat profile. 86 108 IPR001611 GO:0005515
Lan1g0304 847 SMART LRR_typ_2 107 130 IPR003591 -
Lan1g0304 847 SMART LRR_typ_2 203 226 IPR003591 -
Lan1g0304 847 SMART LRR_typ_2 84 106 IPR003591 -
Lan1g0304 847 SMART LRR_typ_2 154 178 IPR003591 -
Lan1g0304 847 Gene3D Phosphorylase Kinase; domain 1 501 616 - -
Lan1g0304 847 SUPERFAMILY Protein kinase-like (PK-like) 520 837 IPR011009 -
Lan1g0304 847 SUPERFAMILY L domain-like 34 412 - -
Lan1g0304 847 ProSiteProfiles Leucine-rich repeat profile. 109 131 IPR001611 GO:0005515
Lan1g0304 847 PRINTS Leucine-rich repeat signature 87 100 - -
Lan1g0304 847 PRINTS Leucine-rich repeat signature 348 361 - -
Lan1g0304 847 Gene3D Transferase(Phosphotransferase) domain 1 617 847 - -
Lan1g0304 847 Pfam Protein kinase domain 545 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0304 Lan-Chr1 2236341 2239797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0304 57 843 Receptor kinase-like Gene Family AT4G39400 34.611 2.68e-108 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lan1g0304 Pkinase 1.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0304 - - gmx:100797738 1400.57