Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0297 ATGGCTATGCTTCGCAAATTGTTCTTTCACACGCCTCCTGATAATCTTATTGAAATTTGCGACAGAGTCTATGTTTTTGATTGCTGCTTCGTCACGGAAGCATGGAATGAAGATAAATACAAAGTGTACATGGATGGAATAGTAGGCCAGCTTCGAGAGAATTTGACTGATGCTTCCATTTTGGTATTCAATTTCCGCGAGGAAAACAGTAAGAGTCAATTAGCAAACATCATGTCTGATTATGACATTACCATCATGGACTATCCTCGCCACTATGAGGGTTGCCCCATTCTCAAAATGGAGCTAATTCACCACTTCTTAAGATCTGGTGAAAGCTGGCTCTCACTTGGTGAGCACAATGTGTTGTTGATGCATTGTGAACGTGGTGGTTGGCCCGTTTTAGCTTTCATGCTTGCTGCATTGTTGATTTATAGAAAGGTTTGTACCGGGGAGCGTAGAACTTTGGAAATGGTTTACAGGCAGGCGCCACACGAGCTTTTGCATCTGTTGACGCCGATGAATCCTGTCCCTTCCCAATTGAGGTATCTGCAGTATGTTTCCAGGAGGAATGTGACCTTGGATTGGCCTCCATTGGATAGGGCACTCATGTTGGACTGCATCATTCTTAGATTTATTCCAAACTTTGATGCGCAAGGTGGTTGTCATCCAGTGCTTAGAATTTATGGCCAGGATCCTTTTAGTGCAGATAAGAAAACAAAAATGATGTACTCAACGCCAAAGAGAACCAGAAATGTCAGAGCTTACAAACAGGGAGAGTGCAAACTAATTAAAATTGATATCAATTGCCATATTCAAGGTGATGTCGTGATTGAGAGCATTAACTTGAGTGGTGACATGGAGCGCGAAATAATGATGTTCCGTGTCATGTTCAACACAGCTTTTGTTAGATCTAATATACTAATGCTTAACCGGGATGAAGTTGACATTTTATGGGACACTGAAGATCACTTTCCAAAGGATTTCAGAGCAGAGATCCTTTTCTCAGAGTTGGATGCTGCTGCAGCAGTTACTGCAGATGGCACCTCATGCTTTGATGAGAAAGATGGACTGCCAGTGGAAGCCTTTGCCAAGGTTCAAGAGTTTTTTAGCCATGTGGACTGGTTGAGTCCTAAGGCAGATGCTGCACTTAATGTACTCCAACAGCTAAGTGTTGCAGTTATCATGAACAACAAGTTGGATAGAGTTTCTGATCAGTCTTCCTCTTCGTCTAAGCAATCTCCAGATAAAGATATAATGAGTAGAAAAAAGGATAAGATCAACAAGGTTGACGCTACTCGGCAACAGCCTAGTACTTCTGACGTGGTCTGTCAAGAAACGCCCAGCGCTTCTGGAAGAACCTCTGCTTCTAGTAAATGTCTGACATGTTCTACAAATATTGACAAAAAACCGCAGGCATGTGATACTGCTTTATCTGGTTTTGTGGATACTGCTCTTTCCCCAGAAACACCTCCACTGCAGCCTCCCTCAACTACTTGTGCTAAAGATTTTGATGATTCTCCTCGGCATACGGAATCACTTCCTCATCATATTTTGTCCTCGAAAACAAGACAACATCCTGTCACCGAGGAAGCTAAAGCCCAACCACAAGACAGAAGTCAGTCGTCTATTTCTAGCTCAATATCTGGGACACAATCCTCATCTACTTGTCATAGTAAGTTACCAGCTGATGCTATTTCTCATTCATCAACTTCAGCAATTACTTCAATTCAAGGAACCCGTTCACTTTCTCCCAAAACACCAGCGAAAAAGATTCCGCCTGTTAGAACAAGACCTGAGCCATCTCCTTCACAACCTCCACCTCCACCTCCACCTCCTCCTCCCACTCCACTAAAGGATCATAAACCAGTTAGAGCTAGACCTCCTCCACCTCCACCACCTCCTCTTCTTTCAGGGAAAGCTTCAGGTGTTGCTCTAGCACAACCACCGCCTTCCTCCAATTGCTTTAATCCTTCATTCCAACAGTTCTCACCTGCTCCTGCAGCACCAGCTGTTCCACCACCTCCGGTACCCTTTGGTAAAGGAGGTCTAAAATCAGGCAGTGCTTGTCCGGGCTCTATTTCTGTGGGTGGTAATGGAAATAATGTGTCTGCTACAACAGGACCTCAATCTAATTTGCCGTCAGGCTCTAAAGGACGAATTCTATCACGTACGATAAGTTCAAAGAATAACACCAAAAAGTTGAAGCCATTGCATTGGCAAAAACTACCAAGAGCAGTGCAAGGAAGTTTATGGGATGAGACACAAAAATCTGGCAAAGCTTCCAATGCCCCAGAGATTGACATGTCGGAACTTGAGAATCTCTTCTCAGCATCAGTCCCAAGCTCAGACCCTGCAAAGAAGTCAAATATCCGAAGCTCAGTTGGGCATAAATATGAAAAAGTGCAACTGATTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTACATGATTTAATGAGCTCAGTGCTAGCATTGGAACAGTCAGCACTAGACACTGATCAAGTTGAAAACCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGAAATTACTCAAGGGTTATACAGGGGAAAAGGAGAAGTTAGGGAGATGCGAACAGTTCTTCCTCGAGTTGATGCAAATACCGCGTGTAGAAACCAAGCTCAGAGTTTTTTCATTCAAGATTCAGTTCAATTCTCAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTCTGGGAAATGCTTTGAACCAAGGAACTGTTAGGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACAGAGACACGTGCACGAAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTGGCTGACCAACTACCAGAAGTTTTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCGGCAGCGAAGATCCAAATTAAGTTTCTGGCAGAGGAGATGCAAGCTGTAAGCAAAGGATTAGAGAAAGTTGTACAGGAACTATCAACCTCTGAAAATGATGGTCCTATATCAGAAACTTTCCGCAAGAATTTGAAAGGGTTCCTCTCTTCTGCTGAAGCTGAAGTGCGTTCATTGGCTTCATTATATTCTGGCGTGGGTAGGAATGTAGATGCGTTGATTCTTTACTTCGGTGAAGATCCCTTTCGCTGCACTTTTGAGCAAGTTGTCACAACTTTACTCAACTTCACTAGAATGTTCAACAAAGCCCATGAAGAAAACTGCAAGCAGCTAGAGCTTGAAATGAAGAAAACAAAAGAAAGTGAGAAAAAGAAATGTGAATCTGAAAGGATATTACCTACAACGGTCAGCACTGGCAATGTCAAATGA 3369 0.4268 MAMLRKLFFHTPPDNLIEICDRVYVFDCCFVTEAWNEDKYKVYMDGIVGQLRENLTDASILVFNFREENSKSQLANIMSDYDITIMDYPRHYEGCPILKMELIHHFLRSGESWLSLGEHNVLLMHCERGGWPVLAFMLAALLIYRKVCTGERRTLEMVYRQAPHELLHLLTPMNPVPSQLRYLQYVSRRNVTLDWPPLDRALMLDCIILRFIPNFDAQGGCHPVLRIYGQDPFSADKKTKMMYSTPKRTRNVRAYKQGECKLIKIDINCHIQGDVVIESINLSGDMEREIMMFRVMFNTAFVRSNILMLNRDEVDILWDTEDHFPKDFRAEILFSELDAAAAVTADGTSCFDEKDGLPVEAFAKVQEFFSHVDWLSPKADAALNVLQQLSVAVIMNNKLDRVSDQSSSSSKQSPDKDIMSRKKDKINKVDATRQQPSTSDVVCQETPSASGRTSASSKCLTCSTNIDKKPQACDTALSGFVDTALSPETPPLQPPSTTCAKDFDDSPRHTESLPHHILSSKTRQHPVTEEAKAQPQDRSQSSISSSISGTQSSSTCHSKLPADAISHSSTSAITSIQGTRSLSPKTPAKKIPPVRTRPEPSPSQPPPPPPPPPPTPLKDHKPVRARPPPPPPPPLLSGKASGVALAQPPPSSNCFNPSFQQFSPAPAAPAVPPPPVPFGKGGLKSGSACPGSISVGGNGNNVSATTGPQSNLPSGSKGRILSRTISSKNNTKKLKPLHWQKLPRAVQGSLWDETQKSGKASNAPEIDMSELENLFSASVPSSDPAKKSNIRSSVGHKYEKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEQSALDTDQVENLIKFCPTKEEMKLLKGYTGEKEKLGRCEQFFLELMQIPRVETKLRVFSFKIQFNSQIRNSVKLKRIMQTILSLGNALNQGTVRGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADQLPEVLDFSKDLANLEPAAKIQIKFLAEEMQAVSKGLEKVVQELSTSENDGPISETFRKNLKGFLSSAEAEVRSLASLYSGVGRNVDALILYFGEDPFRCTFEQVVTTLLNFTRMFNKAHEENCKQLELEMKKTKESEKKKCESERILPTTVSTGNVK* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0297 1122 MobiDBLite consensus disorder prediction 484 735 - -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 745 764 - -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 415 430 - -
Lan1g0297 1122 Gene3D - 200 339 - -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 402 456 - -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 431 456 - -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 591 618 - -
Lan1g0297 1122 SMART it6_source 724 1122 IPR015425 -
Lan1g0297 1122 PANTHER FORMIN-J 1 1105 - -
Lan1g0297 1122 Gene3D Formin, FH2 domain 723 1091 IPR042201 -
Lan1g0297 1122 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Lan1g0297 1122 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Lan1g0297 1122 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lan1g0297 1122 Pfam Formin Homology 2 Domain 728 1080 IPR015425 -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 646 663 - -
Lan1g0297 1122 ProSiteProfiles Formin homology-2 (FH2) domain profile. 724 1106 IPR015425 -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 1099 1122 - -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 533 584 - -
Lan1g0297 1122 Coils Coil 1081 1101 - -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 691 733 - -
Lan1g0297 1122 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 10 187 IPR029021 -
Lan1g0297 1122 MobiDBLite consensus disorder prediction 502 532 - -
Lan1g0297 1122 SMART PTEN_C2_2 197 336 IPR014020 -
Lan1g0297 1122 Gene3D Protein tyrosine phosphatase superfamily 15 199 IPR029021 -
Lan1g0297 1122 SUPERFAMILY Formin homology 2 domain (FH2 domain) 627 1098 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0297 Lan-Chr1 2183988 2192610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0297 1 400 Protein tyrosine phosphatase (PTP) family AT5G58160 63.342 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0297 - - lang:109346359 2077.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1240 12 18376001 18386510 Lan1g0297 1 2183988 2192610 LSH