Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan1g0278 | ATGTGTGCGAAGGAAAAGGGGGAGCAAGTTGCTCAAAATACAGAGAACATTGGTGACAGAAGGGTGTCATGGCCTTTGCATTGTGATATCTTGCATGCCCACATGGATAATTTGGAAAAAGACTCTACTTTTACAACTTCCATAGCAAATTCACTTCCTTTGGAAAGCATATGTGAGAATTCAGAAATTGCTGACAAAAAACAGAACCTGATGAGTTTTGTCCCGGTTCTTCGGTCTGGAGAGTGGTCAGATATTGGAGGTCGCCCTTACATGGAGGATACCCATATAAGCATTGGAGACTTGGCAAAGAAATTTGGTTATAACATGCTTTGTGAGGAAACTGTTTCATTATATGGTGTATTCGATGGCCATGGGGGGAAGAGTGCTGCACAATTCGTCCGCGATCACTTGCCAAGGTTGATTGTCGAGGATGCTGATTTTCCTTTCGAACTTAAGAAGGTAGTCACCAGGTCATTTTTAGAGACTGATGCAGAGTTTGCAAAAACATGCTCTATTGAGTCTTGCCTATCTTCTGGTACAACTGCACTCACTGCAATTATATTTGGAAGGTCTCTACTTGTAGCGAATGCTGGAGACTGCCGAGCTGTTTTGTGCCATAGCGGAAAGGCTATAGAAATGTCGAAAGATCATAGGCCCTTTTGCATTAAAGAAAGGAAGCGAATAGAGTCCCTAGGTGGATTCGTGGATGATGGTTACCTAAATGGACTATTAGGCGTTACTCGTGCTTTAGGTAACTGGCATCTTGAAGGAATGAAGGAAAATAGTGGAAGAGGTGGACCATTGATCGCCGAGCCTGAAATTAAAATGGCAACATTGACCAAAGAAGACGAGTTACTGATAATTGGCAGTGATGGAATCTGGGATGTTTTTCGTAGCCAAAACGCTGTAGATTTTGCAAGAAGAAGGCTTCAAGAGCACAATGATGTGAAACAATGTTGCAAGGAAATAGTAGAGGAAGCAATAAAGAGAGGAGGAACAGATAACTTGACAGTTGTGATTGTATGTTTTCACCCCGATCCACCGCCGCCTGTTGTTGTAGAAAGGCCAAGAGTCAGGAGAAGCATATCTGCTGAGGGACTTCAGAATCTTAAATGCTTGCTAGAAGGATAA | 1131 | 0.4271 | MCAKEKGEQVAQNTENIGDRRVSWPLHCDILHAHMDNLEKDSTFTTSIANSLPLESICENSEIADKKQNLMSFVPVLRSGEWSDIGGRPYMEDTHISIGDLAKKFGYNMLCEETVSLYGVFDGHGGKSAAQFVRDHLPRLIVEDADFPFELKKVVTRSFLETDAEFAKTCSIESCLSSGTTALTAIIFGRSLLVANAGDCRAVLCHSGKAIEMSKDHRPFCIKERKRIESLGGFVDDGYLNGLLGVTRALGNWHLEGMKENSGRGGPLIAEPEIKMATLTKEDELLIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKEIVEEAIKRGGTDNLTVVIVCFHPDPPPPVVVERPRVRRSISAEGLQNLKCLLEG* | 377 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan1g0278 | 376 | Gene3D | - | 59 | 346 | IPR036457 | - | |
Lan1g0278 | 376 | Pfam | Protein phosphatase 2C | 90 | 335 | IPR001932 | - | |
Lan1g0278 | 376 | CDD | PP2Cc | 78 | 343 | IPR001932 | - | |
Lan1g0278 | 376 | ProSiteProfiles | PPM-type phosphatase domain profile. | 78 | 343 | IPR001932 | - | |
Lan1g0278 | 376 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 364 | IPR015655 | GO:0004722|GO:0006470 | |
Lan1g0278 | 376 | ProSitePatterns | PPM-type phosphatase domain signature. | 117 | 125 | IPR000222 | GO:0043169 | |
Lan1g0278 | 376 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 1 | 364 | - | - | |
Lan1g0278 | 376 | SUPERFAMILY | PP2C-like | 68 | 345 | IPR036457 | - | |
Lan1g0278 | 376 | SMART | PP2C_4 | 68 | 341 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan1g0278 | Lan-Chr1 | 2045090 | 2055370 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan1g0278 | 67 | 376 | PP2C-type Phosphatase Gene Family | AT2G25620 | 58.974 | 1.17e-131 | 380 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | DBP | Lan1g0278 | PP2C | 3.1e-67 | CL0238 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan1g0278 | K14803 | - | gmx:100782648 | 602.053 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan1g0278 | 1 | 2045090 | 2055370 | Lan1g0278 | 1 | 2045090 | 2055370 | ECH | |
Lan12g1125 | 12 | 17634730 | 17637557 | Lan1g0278 | 1 | 2045090 | 2055370 | LSH | |
Lan1g0278 | 1 | 2045090 | 2055370 | Lan15g0255 | 15 | 2900310 | 2904208 | PCT | |
Lan15g0255 | 15 | 2900310 | 2904208 | Lan1g0278 | 1 | 2045090 | 2055370 | PCT |