Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0269 ATGTCATCCGAGATCGAAGAGGTTCAATCCCGAGATCAACAATTGCCATCGGCTTCGGCTTCATCCTCCGCCGGCGGTGAAGTTGAGGATGAGAGCCTCCGCAACGATGTCTACACGGCGGCAGCTTACGGGGATTTGGAGAAGCTGCACCGATTGGTGGAGCAAGAGGGTTGCTCCGTTACCGAGCCTGATGGGTTGGGTTACTATGCGCTTCAGTGGGCCGCACTTAATAATCGCAGTGCCGCTGCTCAGTATATCATTGAGCATGGGGGAGATGTAAATGTGACGGATCATACTGGCCAGACAGCATTACATTGGAGTGCAGTTCGAGGTGCTATCCAGGTTGCAGAGCTTTTACTCCAAGAGGGTGCCCGGGTGAATGCTGCTGATATGAACGGGTATCAGACAACACATGTTGCTGCTCAATATGGTCAGACAGCTTTCCTTTACCACGTCGTTTCAAAATGGAATGCTGATCCCGATGTTCCTGATAATGATGGAAGAAGTCCGTTGCATTGGGCTGCATACAAAGGTTTTGCAGATTCTATACGTCTACTGTTATTTCTTGATGCACATAGGGGACGTCAAGATAAAGAGGGTTGCACACCTCTTCATTGGGCTGCTATCAGGGGTAACTTGGAGGCCTGTACTGTGTTAGTACAGGCTGGCAAGAAGGAAGACCTAATGGTGACCGACAATACTGGGCTCACACCTGCACAGCTTGCATCTGATAAGAATCACAGACAAGCTGCTTTTTTCCTTGGAAATGCCCGAAGACTGCTTGACAAACGCTATGATAGGAACAGCCGCCTTGGAAAGATTTCCAAGTTAGGACTTGCTCCTGTACTATGGTGTATAATTTTTGTGCTCTTGATCACCTATATTCATTCTGTCATCTTGGCAACAAATCTGCCAAAGCTGACAGCTGCTGCTGCTCTTCTTGCATGGCTTGGAGTTTTACTTGCAACTGTGGGATTGGCTATTCTTTACAAGTGTAGCAGCAAGGATCCAGGTTATGTCAAAATGAATGTGCATGACACCGAGAATATGAAAGATGATGAGCCTCTCTTGAAGATTGAGATAAATAATCCTGCTTTGCTAGCTGGAAACTGGTCCCAGCTTTGCGCAACATGCAAGATTGTCAGACCTCTTCGTGCAAAACACTGTTCTACCTGTGATCATTGTGTGGAACAATTTGATCATCATTGTCCTTGGGTATCAAATTGCATTGGCAAGAAGAACAAATGGGATTTCTTTGTTTTTCTTGTTCTTGAAGTTTCAGCAATGTTGGTCACTGGTGGAGTTTCTCTTACAAGATTATTGACTAATCCACTTGCTCCTTCTTCCTTTGGAGCATGGATTCAGTATATTGGTAAGGATCATGTTGGTGCAATATCATTTTTAATTGCTGATTTTTTCCTATTCTTCGGTGTGTTCGCTCTAACAGTTGTTCAGGCTAGTCAGATAGCACGCAATATCACGACAAATGAAATGGCAAATTCAATGCGGTATAGCTACCTAAAAGGTCCAGGTGGTAGATTTAAAAACCCATATGATCATGGTACCAAGAAGAACTGCTCTGATTTCTTGATCAATGGATACAATGAAGATGTGGAGTGCATTGAAATTGGTAATTCAGAGGAGGGTATTGGAATGTTGCCCATGTCAAGGAGCTCAAACTTAAAAAATGGGGACTCACATTCTCATTTTGATCATACAAAGGGCAATGAGAATGGCCATGTTGTTATTGATGTGAATTCCAACAATACCACCAACTCAAAAACACATCATGGTCATATTAATGGCCATGTTCATTCTTCACATTGTAGTCATAATAATAACAATGGCAAAACTAAAGATGACAGCATTCCAGAGGGCTTAGGTCTTGGCCTCGGACGGAACACCAGATCTGTTGCATCCTCGTGA 1926 0.4413 MSSEIEEVQSRDQQLPSASASSSAGGEVEDESLRNDVYTAAAYGDLEKLHRLVEQEGCSVTEPDGLGYYALQWAALNNRSAAAQYIIEHGGDVNVTDHTGQTALHWSAVRGAIQVAELLLQEGARVNAADMNGYQTTHVAAQYGQTAFLYHVVSKWNADPDVPDNDGRSPLHWAAYKGFADSIRLLLFLDAHRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMVTDNTGLTPAQLASDKNHRQAAFFLGNARRLLDKRYDRNSRLGKISKLGLAPVLWCIIFVLLITYIHSVILATNLPKLTAAAALLAWLGVLLATVGLAILYKCSSKDPGYVKMNVHDTENMKDDEPLLKIEINNPALLAGNWSQLCATCKIVRPLRAKHCSTCDHCVEQFDHHCPWVSNCIGKKNKWDFFVFLVLEVSAMLVTGGVSLTRLLTNPLAPSSFGAWIQYIGKDHVGAISFLIADFFLFFGVFALTVVQASQIARNITTNEMANSMRYSYLKGPGGRFKNPYDHGTKKNCSDFLINGYNEDVECIEIGNSEEGIGMLPMSRSSNLKNGDSHSHFDHTKGNENGHVVIDVNSNNTTNSKTHHGHINGHVHSSHCSHNNNNGKTKDDSIPEGLGLGLGRNTRSVASS* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0269 641 ProSiteProfiles Ankyrin repeat profile. 99 131 IPR002110 GO:0005515
Lan1g0269 641 MobiDBLite consensus disorder prediction 605 620 - -
Lan1g0269 641 Pfam Ankyrin repeats (3 copies) 39 130 IPR002110 GO:0005515
Lan1g0269 641 ProSiteProfiles Ankyrin repeat region circular profile. 99 130 - -
Lan1g0269 641 ProSiteProfiles Ankyrin repeat region circular profile. 199 223 - -
Lan1g0269 641 SMART ANK_2a 66 95 IPR002110 GO:0005515
Lan1g0269 641 SMART ANK_2a 166 198 IPR002110 GO:0005515
Lan1g0269 641 SMART ANK_2a 199 230 IPR002110 GO:0005515
Lan1g0269 641 SMART ANK_2a 32 62 IPR002110 GO:0005515
Lan1g0269 641 SMART ANK_2a 234 263 IPR002110 GO:0005515
Lan1g0269 641 SMART ANK_2a 99 128 IPR002110 GO:0005515
Lan1g0269 641 Pfam Ankyrin repeats (many copies) 195 242 IPR002110 GO:0005515
Lan1g0269 641 MobiDBLite consensus disorder prediction 588 641 - -
Lan1g0269 641 MobiDBLite consensus disorder prediction 1 28 - -
Lan1g0269 641 PANTHER - 1 600 - -
Lan1g0269 641 PANTHER PROTEIN S-ACYLTRANSFERASE 24 1 600 - -
Lan1g0269 641 Gene3D - 153 259 IPR036770 -
Lan1g0269 641 MobiDBLite consensus disorder prediction 1 31 - -
Lan1g0269 641 ProSiteProfiles DHHC domain profile. 373 423 - -
Lan1g0269 641 ProSiteProfiles Ankyrin repeat profile. 199 231 IPR002110 GO:0005515
Lan1g0269 641 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Lan1g0269 641 Pfam Ankyrin repeat 166 187 IPR002110 GO:0005515
Lan1g0269 641 Gene3D - 28 152 IPR036770 -
Lan1g0269 641 Pfam DHHC palmitoyltransferase 373 500 IPR001594 GO:0016409
Lan1g0269 641 ProSiteProfiles Ankyrin repeat region circular profile. 166 187 - -
Lan1g0269 641 ProSiteProfiles Ankyrin repeat profile. 166 198 IPR002110 GO:0005515
Lan1g0269 641 SUPERFAMILY Ankyrin repeat 33 254 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0269 Lan-Chr1 1976124 1983101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0269 40 219 Ion Channels AT2G25600 30.939 4.56e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0269 K20032 - gmx:100777470 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0269 1 1976124 1983101 Lan1g0269 1 1976124 1983101 ECH
Lan12g1134 12 17689696 17696666 Lan1g0269 1 1976124 1983101 LSH
Lan1g1153 1 21545024 21552163 Lan1g0269 1 1976124 1983101 LSH