Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0266 ATGGGTGCAACCATTCTCCCAGATCTCGGAACCGAGATTTTGATCCCTATTTGCGCTGTTATTGGAATCGTTTTCGCACTTTTCCAATGGTTTATTGTCTCTAAAGTTAAGGTCACTGCTTCTAGAGAGAGTTCTCCCAACGTTGCTAGTAAGAATGGCTACAACGAATACCTTATTGAAGAAGAGGAAGGTGTTAATGATCACAACGTTGTTGCCAAATGCGCCGAAATTCAAAATGCTATCTCTGAAGGTGCAACATCGTTCCTTTTTACCGAATATAGATATGTGGGAATCTTCATGGTGTTTTTTGCTGTCCTGATATTCATTTTCCTTGGCTCTGTGGAAGGATTCAGCACAAGCCACCACCCTTGCACCTACGATCAAACTAAGATCTGTAAGCCAGCTCTTGCCACCGCCCTTTTCAGCACCATAGCATTCCTGCTCGGTGGCATCACATCAGTAATTTCTGGTTTCCTTGGAATGAAAATTGCAACTTATGCTAATGCAAGAACCACATTGGAAGCTAGAAAGAGTGTTGGGAAGGCATTCATAGTAGCATTTAGATCTGGTGCAGTTATGGGATTTCTCCTTGCTGCAAACGGTCTTTTGGTTCTATACATTACCATCAACCTGTTCAAGATTTACTACGGTGACGACTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGTTCTTCCATGGCACTTTTTGGAAGAGTTGGTGGAGGTATCTACACTAAGGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAGGTTGAAAGGAACATTCCCGAGGATGACCCTAGAAATCCAGCTGTGATTGCTGATAATGTTGGTGACAATGTTGGTGACATTGCTGGCATGGGTTCTGATCTTTTTGGTTCATATGCTGAGGCATCTTGTGCTGCTCTCGTCGTTGCTTCCATCTCTTCTTTTGGGGTGAATCACGAGTTGACTGCTATGTTATACCCTCTTACTATCAGTTCTGTGGGTATCCTCGTTTGCTTGCTTACCACCTTATTTGCAACCGACTTTTTTGAGATCAAGGCTGTTAAGGAAATTGAACCAGCATTGAAAAAACAGCTCATCATTTCCACTGTGTTTATGACTGTTGGGATTGCAATTGTTAGTTGGATTGCACTCCCATCTTCATTTACTATCTTCAATTTTGGAGTGCAGAAAGATGTCAAGAACTGGCAGCTATTCCTGTGTGTAGCTGTTGGTCTTTGGGCAGGGCTTATTATAGGATTTGTAACTGAGTACTATACCAGCAATGCATATAGCCCTGTGCAAGATGTTGCAGACTCCTGTAGGACCGGTGCTGCTACTAATGTTATCTTTGGCCTTGCCTTGGGATACAAATCTGTCATTATTCCAATTTTTGCCATTGCAGTTAGTATTTTTGTTAGTTTCAGCTTTGCTGCGATGTATGGAGTTGCTGTTGCTGCACTCGGGATGTTGAGTACCATAGCCACTGGATTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGGATGAGTCACAGAATCCGAGAGAGGACTGATGCTCTTGATGCTGCAGGAAACACAACTGCTGCTATTGGAAAGGGGTTTGCCATTGGTTCCGCTGCCCTTGTGTCTTTGGCCCTCTTTGGTGCCTTTGCGAGCCGAGCTTCTATTACAACAGTTGATGTGTTGACTCCAAAGGTTTTTATTGGTCTAATTGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAAAGTGTTGGAAAAGCTGCTCTGAAGATGGTTGAGGAAGTACGTAGGCAGTTCAATACCATTCCGGGCTTGATGGAGGGAACTGCTAAGCCTGACTATGCTACATGTGTCAAGATCTCCACCGATGCTTCCATTAAAGAAATGATACCACCTGGTGCTCTTGTGATGCTTACTCCCCTTATTGTTGGCATCCTTTTTGGTGTAGAAACACTTTCTGGTGTCCTTGCTGGATCTCTGGTGTCTGGTGTACAGATTGCTATCTCTGCATCCAACACTGGTGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGCATCCGAGCATGCAAGAAGCCTTGGTCCAAAAGGGTCAGATCCACACAAAGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTTAAGGATACTTCTGGACCATCACTTAACATCCTCATCAAGCTTATGGCTGTTGAATCTCTTGTGTTTGCACCTTTCTTTGCTACACATGGTGGCTTACTTTTCAAGTATCTTCAATAG 2304 0.4431 MGATILPDLGTEILIPICAVIGIVFALFQWFIVSKVKVTASRESSPNVASKNGYNEYLIEEEEGVNDHNVVAKCAEIQNAISEGATSFLFTEYRYVGIFMVFFAVLIFIFLGSVEGFSTSHHPCTYDQTKICKPALATALFSTIAFLLGGITSVISGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLYITINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVASISSFGVNHELTAMLYPLTISSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTVFMTVGIAIVSWIALPSSFTIFNFGVQKDVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFASRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGKAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKYLQ* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0266 767 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lan1g0266 767 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lan1g0266 767 Pfam Inorganic H+ pyrophosphatase 21 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lan1g0266 767 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 764 - -
Lan1g0266 767 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lan1g0266 767 PIRSF H+-PPtase 11 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0266 Lan-Chr1 1958402 1963297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0266 5 629 Primary Pumps ATPases AT1G15690 88.376 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0266 K23025 - gmx:100775864 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0266 1 1958402 1963297 Lan1g0266 1 1958402 1963297 ECH
Lan12g1139 12 17722987 17727445 Lan1g0266 1 1958402 1963297 LSH
Lan1g1148 1 21520707 21525294 Lan1g0266 1 1958402 1963297 LSH