Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0231 ATGAAGAAGGTGAGGAGAAAGATTGGGAAGTATGAGGTGGGTCGAACTATTGGTGAAGGCACATTCGCTAAGGTTAAATTCGCCAAAAACACGGAAACAGGGGAGAGTGTGGCTATTAAAGTTATGGCTAAGAGAACCATTCTCAAGCACAAAATGGTTGAACAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGGCATCCTAATGTAGTTAGGTTGCATGAGGTTCTAGCCAGCCAGTCCAAGATCTACATTATTCTGGAGTTTGTAATGGGGGGTGAATTATATGATAAAATTGTTCAGCTAGGAAAGGTTTCTGAAAATGAATCTAGGCGCTACTTTCAGCAACTTATAGATGCTGTTGCTCATTGTCACAGAAAAGGCGTGTATCATAGAGATTTGAAGCCTGAAAACCTTCTTCTTGATGATTATGGGAATCTGAAGATTTCTGACTTTGGATTGAGTGCATTGACTAAGAAGGGTGTTGACCTTCTTCACACCACATGTGGGACCCCAAATTATGTTGCCCCTGAGGTGCTCAGCAATCTAGGTTATGATGGTGCAGCAGCAGATGTTTGGTCATGTGGAGTCATCCTCTATGTTCTGATGGCTGGATATCTTCCTTTTCAGGAGGCAGACCTTCCAATGCTATACAAAAGGATCAGTGCTGCAGAGTTTGTTTGCCCATTCTGGTTTTCTACTGGGGCAAAGACATTGATACATAAAATTCTGGATCCTAATCCTAAAACAGACCATTTTGTTGTGGAGAGGTCGGAAAGTACTGAAGGAGGTCCGTTGATAATGAATGCATTTGAGATGATTACCTTATCACAAGGGTTGAACCTTTCACCGCTATTTGACAGGCATCAGGATTTTGTGAAGCGGCAAACTCGTTTTGTTTCCCGTAAACCTGCAAGAGTTATAATTTCATCTATTGAAGTTGCTGCAGAATCAATGGGTCTTAGGATCCGTTCTCGCAATTACAAGATGAGGCTTGAAGGAGTTTCTGCAAGTAATGTTGGACAACTTGCTGTGGTGTTGGAGGTGTATGAAGTTGCACCATCCCTTTTCATGGTAGATGTTCGAAAGGCTGCCGGCGATACTCTTGACTATCACATGTTTTACAAGAATCTTACTGCCAAAGTAGAAAACATTATTTGGAGACCGTCCGAGACTATACCGAATTCTAGTCTGCTTCGAAATCTTACTCTTTGA 1218 0.4163 MKKVRRKIGKYEVGRTIGEGTFAKVKFAKNTETGESVAIKVMAKRTILKHKMVEQIKREISIMKIVRHPNVVRLHEVLASQSKIYIILEFVMGGELYDKIVQLGKVSENESRRYFQQLIDAVAHCHRKGVYHRDLKPENLLLDDYGNLKISDFGLSALTKKGVDLLHTTCGTPNYVAPEVLSNLGYDGAAADVWSCGVILYVLMAGYLPFQEADLPMLYKRISAAEFVCPFWFSTGAKTLIHKILDPNPKTDHFVVERSESTEGGPLIMNAFEMITLSQGLNLSPLFDRHQDFVKRQTRFVSRKPARVIISSIEVAAESMGLRIRSRNYKMRLEGVSASNVGQLAVVLEVYEVAPSLFMVDVRKAAGDTLDYHMFYKNLTAKVENIIWRPSETIPNSSLLRNLTL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0231 405 ProSiteProfiles Protein kinase domain profile. 11 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0231 405 Pfam Protein kinase domain 11 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0231 405 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Lan1g0231 405 PANTHER - 257 399 - -
Lan1g0231 405 PANTHER - 4 255 - -
Lan1g0231 405 CDD CIPK_C 270 379 - -
Lan1g0231 405 ProSiteProfiles NAF domain profile. 264 288 IPR018451 GO:0007165
Lan1g0231 405 Pfam NAF domain 266 325 IPR004041 GO:0007165
Lan1g0231 405 SMART serkin_6 11 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0231 405 SUPERFAMILY Protein kinase-like (PK-like) 8 250 IPR011009 -
Lan1g0231 405 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 255 - -
Lan1g0231 405 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 257 399 - -
Lan1g0231 405 Gene3D Kinase associated domain 1, KA1 264 389 - -
Lan1g0231 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lan1g0231 405 Gene3D Transferase(Phosphotransferase) domain 1 2 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0231 Lan-Chr1 1672164 1679328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0231 1 331 CBL-interacting serine-threonine protein kinases AT5G35410 65.323 7.13e-179 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan1g0231 Pkinase 3.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0231 - - gmx:100811380 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0231 1 1672164 1679328 Lan1g0231 1 1672164 1679328 ECH