Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0205 ATGGAAGAGCTCTTGTCTTGGTTCAAGCTTATTTCTTTTTCTTTAGTGTTTCTTCTACTTGTGCTCAAGGTTACAGTGGTTCTATGGTGGAGACCTAGGAAAATTGAAGGCCATTTCTCTAAACAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGAAACGTTAAAGAACTTGTTGACATGATGTTGAAGGCTTCTTCTCAACCCATGCCTTTATCTCATAACATTCTACCCAGAGTCTTTTCCTTCTATCATCACTGGAAGAAAATTTATGGTACAACATTCCTAGTTTGGTTTGGACCCACTGTTCGTCTTACCGTGTCTGATCCAGACCTCATACGAGAAATATTCACATCCAAGTCAGAATTTTATGAAAAAAATGAAGCTCCCCCACTTGTGAAGCAGCTAGAAGGTGATGGGCTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCATAGAAGAATTATCTCTCCCACTTTCCACATGGAAAATCTCAAATGTTTGATACCCGTGATGGGAACAAGCATGGTTGAGATGTTGGAGAAGTGGTCGGTAATGGGGGATGAGAAAGGTGAGGTGGAAATTGAAGTTTCAGAGTGGTTTCAAAACCTAACCGAAGATATCATTACTAGAACAGCATTTGGAAGCAGTTATGAAGATGGCAAAGCCATTTTCAGGCTACAATCCCAACAAATGCTCTTAGCTGCTGATGCATTCCAAAAAGTCTTCATTCCAGGTTATAGATTCTTTCCCACAAGGAGGAATATAAAATCTTGGAAATTGGAGAGGGAAATTAAGAAATCTTTGGTGAAGTTGATCGAAAAAAGGAAAGAGAATTCGAGTGAGAATGAGATGAGAGTGGAAAAAGGAGCAAAGGATTTGCTGGGGCTAATGATAAATGCATCCAAAGCTAATTCATCATCCAATGTTACAGTGGGTGACATCGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGGAAACAAACCACATCAAACTTGCTGACGTGGACGACCATTCTCTTAGCTATGCACCCACAATGGCAGGACCAGGCACGTGATGAGGTCCTCAACATGTGTGGAGCACGTGACCTTCCTACAAAAGATCATGTTGTAAAGCTCAAGACGCTGAGCATGATTGTGAACGAGTCTCTAAGACTATACCCTCCAACAATAGCCACAATCAGACGGACCAAAAGAGATGTGGATTTAGGGTGCTACAAGATACCACGTGGGACAGAGCTATTGATTCCAATCTTGGCCGTTCATCATGATCAAGGGATATGGGGCAATGATGTAAATGAATTCAATCCTGGCCGTTTCTCAGAAGGGGTAGCGCGTGCAGCGAAGCATCCTGTGGCTTTCATACCTTTTGGTCTAGGTGTGCGCACATGCATAGGACAAAACCTTGCAGTGCTACAAACCAAACTTGCCCTTGCAATCATGCTTCAGCGTTTTAGTTTCAGGTTGGCCCCTACTTATCAGCACGCACCAACGGTTCTGATGTTACTCTACCCGCAGCATGGGGCACCAATCATTTTCCAACGTTTGTCCAAAATAATTGATCATCATCATCAAGGGTCCTGA 1587 0.4297 MEELLSWFKLISFSLVFLLLVLKVTVVLWWRPRKIEGHFSKQGIRGPPYRFFIGNVKELVDMMLKASSQPMPLSHNILPRVFSFYHHWKKIYGTTFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKCLIPVMGTSMVEMLEKWSVMGDEKGEVEIEVSEWFQNLTEDIITRTAFGSSYEDGKAIFRLQSQQMLLAADAFQKVFIPGYRFFPTRRNIKSWKLEREIKKSLVKLIEKRKENSSENEMRVEKGAKDLLGLMINASKANSSSNVTVGDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPQWQDQARDEVLNMCGARDLPTKDHVVKLKTLSMIVNESLRLYPPTIATIRRTKRDVDLGCYKIPRGTELLIPILAVHHDQGIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIMLQRFSFRLAPTYQHAPTVLMLLYPQHGAPIIFQRLSKIIDHHHQGS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0205 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Lan1g0205 528 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 512 - -
Lan1g0205 528 Pfam Cytochrome P450 81 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 Gene3D Cytochrome P450 29 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PANTHER CYTOCHROMEA2 5 512 - -
Lan1g0205 528 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g0205 528 SUPERFAMILY Cytochrome P450 43 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0205 Lan-Chr1 1507002 1511875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0205 2 518 Cytochrome P450 AT2G26710 77.159 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0205 K15639 - gmx:100780027 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0205 1 1507002 1511875 Lan1g0205 1 1507002 1511875 ECH
Lan1g1105 1 21154018 21158646 Lan1g0205 1 1507002 1511875 LSH