Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0202 ATGGTGGTGCCTATTTCCATGTGCGGTGACCCAGAGCTTGAACAACTCTCAAGAGATGGTAGTCAATATAGTCTCTCCACCGGTATTTTACCTGCTCTCGGTGCCAGAAGTAGTCGCAGACTCCAACTCAGACGCTTCATAATTTCCCCTTATAATAACCATTACAGGGTATGGGAAACTTTCCTTATTACTCTAGTGGTGTACACAGCTTGGGTATCTCCATTTGAATTTGGATTCCTTAAGAAACCAAAAGCACCACTATCCATTACTGATAATATTGTGAATGGTTTCTTTGCCGTGGATATAATTCTCACCTTCTTTGTTGCTTACCTCGACAAAACTACCTATTTGTTTGTCGATAATCCAAAACAGATAGCTTGGAAATATACAAGAACTTGGTTTGCCTTTGATGTTATCTCTAGCATTCCTTCCGAGCTTATTGAAAAGATATCACCTAAACCTCTCCAATCCTATGGCTTATTCAATATGCTCCGGCTTTGGCGTCTTCGAAGAGTTAGTGCTTTGTTTTCTCGGTTGGAGAAGGACAGAAACTTCAACTATTTCTGGGTTAGGTGTGCCAAGCTTATCTGTGTTACCCTTTTTGCTGTTCATTGTGCTGGATGCTTTTATTATCTTATTGCTGCACGCTATCATGATCCCAAAAGGACATGGATTGGGGCAGTAATGGACAATTTTCTTCAGCAGAGCTTGTGGACCAGATATGTGACATCCATTTACTGGTCTATTACCACTTTAACAACCGTTGGCTATGGAGATTTGCATCCGGTGAACTCAAGAGAAATGATCTTTGACATCTTTTATATGCTCTTCAATCTTGGACTAACAGCATATTTGATTGGTAATATGACCAACCTAGTCGTACATGGCACAAGTAGAACCAGAAAATTTAGAGATACCATACAGGCTGCATCAAGTTTTGCCCAAAGAAATCAATTGCCTGCCCGTTTGCAAGACCAGATGCTTGCTCATTTGTGTTTGAAGTTTAGAACAGACTCGGAGGGGTTGCAGCAGCAAGAGACCCTTGATTCGCTTCCTAAAGCTATAATATCAAGCATTTCACATTATCTTTTTTATTCATTGGTGGATAAAGTCTACTTGTTTCGTGGGGTTTCTAATGACTTACTGTTTCAATTGGTCTCTGAGATGAAAGCTGAGTATTTCCCTCCCAAAGAAGATGTCATCTTGCAGAATGAAGCCCCCACTGATTTTTATATATTAGTAACTGGAGCAGTGGACTTGGTGGTTTATAGAAATGGGGTCGAACATATTGTGAGAGAGGCAAAAACAGGTGATCTTTGTGGTGAGATTGGTGTGCTTTGCTATAAGCCACAACTCTTCACTGTCCGAACGAAGAGATTAAGCCAGCTGCTCAGGCTGAACCGTACTACATTCTTGAATATTATACAAGCCAATGTTGGAGATGGAACCATAATCATTAATAATTTGCTTCAGCATTTGAAAGATCTCAACGACCCAATCATGGATGGTGTTTTGATGGAGACTGAGAACATGTTAGCCCTTGGAAGGATGGACCTACCTGTGAGTCTTTGTTTTGCAGCTGTAAGAGGAGATGACGTCTTGCTACATCAATTGTTAAAGCGGGGTTTGAATCCAAATGAATCCGATAACAATGGAAGGACAGCTTTGCATATAGCAGCATCCAAAGGAAATGAGAACTGTGTCTTGCTTCTGTTGGATTATGGGGCTGATCCTAACGTTAGAGATTCTGATGGTAATATACCACTCTGGGAGGCTATACTTGGTGGACATGAATCAGTGAGCAATGTGCTAGTAGAAAATGGAGCAGATTTGAAACATGGTGACATAGGTCAATTTGCATGCACTGCCGTTGAACAGAACAACCTCAACTTGCTCAAGGGCATAATGCACCATGGAGGAGATATCACACTCCCTAATAGCTCCACAGGGACCACAGCTCTGCATGTTGCAGTGTCCGAAGACAATGTCGAGATTGTCAAATTCCTTTTGGAACATGGAGCTGCCATTGACAAAGCAGACATGCATGGTTGGACTCCAAGAGCCCTAGCAGACCAACAAGGACAAGTAGATATTAAAGCCATTTTTGAGTCCACTGGGGAGCCTAAGTCTCAGTCTTTTGCTGCTATTCCTGAGAACCGAAGTAAGGTCAGGTACCTTGGGAGATTTACAAGTGAGCCAACAATACCTATGCCCCATGATGCATCATTTCACGGAACAAACGGGTCTTGGAGCCAAAGCCGTCCAAGGCGTAGGAACAATAACTTCCATAACTCACTCTTTGGGATAATGTCAGCAGCTCACAAAGGGAAAAATAACTTGCTTTTCCCTTTTAATACTGATAGTGATAATGCTGCAAACAATGGTATGAATAGTAGAGCAAGTTCAATTAGAGTAACAATTAGTTGCCCTGAGAAGGGTGAGGTTGCTGGGAAGCTTATGTTACTACCAGGAAACTTTAAGGAGCTACTTGAGATTGGTGCCAAGAAATTTGGTATCTTTCCTGCTAAGGTTATTTGCAAAGATGGGGCTGAAATTGAAGATATAGAGGTTATCAGAGATGGTGACCATCTTGTTTTTGTCAGTGCTGATGATGGGATGCACAAGTCCAATTCTCCAACACCCACAAACAGCGAGCTTCTATAG 2664 0.4185 MVVPISMCGDPELEQLSRDGSQYSLSTGILPALGARSSRRLQLRRFIISPYNNHYRVWETFLITLVVYTAWVSPFEFGFLKKPKAPLSITDNIVNGFFAVDIILTFFVAYLDKTTYLFVDNPKQIAWKYTRTWFAFDVISSIPSELIEKISPKPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNFNYFWVRCAKLICVTLFAVHCAGCFYYLIAARYHDPKRTWIGAVMDNFLQQSLWTRYVTSIYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPARLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIISSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVVYRNGVEHIVREAKTGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIIQANVGDGTIIINNLLQHLKDLNDPIMDGVLMETENMLALGRMDLPVSLCFAAVRGDDVLLHQLLKRGLNPNESDNNGRTALHIAASKGNENCVLLLLDYGADPNVRDSDGNIPLWEAILGGHESVSNVLVENGADLKHGDIGQFACTAVEQNNLNLLKGIMHHGGDITLPNSSTGTTALHVAVSEDNVEIVKFLLEHGAAIDKADMHGWTPRALADQQGQVDIKAIFESTGEPKSQSFAAIPENRSKVRYLGRFTSEPTIPMPHDASFHGTNGSWSQSRPRRRNNNFHNSLFGIMSAAHKGKNNLLFPFNTDSDNAANNGMNSRASSIRVTISCPEKGEVAGKLMLLPGNFKELLEIGAKKFGIFPAKVICKDGAEIEDIEVIRDGDHLVFVSADDGMHKSNSPTPTNSELL* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0202 887 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Lan1g0202 887 MobiDBLite consensus disorder prediction 736 757 - -
Lan1g0202 887 SUPERFAMILY Ankyrin repeat 523 705 IPR036770 -
Lan1g0202 887 Gene3D - 56 294 - -
Lan1g0202 887 PANTHER K+ TRANSPORTER 1-RELATED 5 872 - -
Lan1g0202 887 ProSiteProfiles cAMP/cGMP binding motif profile. 373 475 IPR000595 -
Lan1g0202 887 PANTHER POTASSIUM CHANNEL AKT1 5 872 IPR045319 GO:0005249|GO:0006813
Lan1g0202 887 Pfam Ion transport protein 56 300 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan1g0202 887 Gene3D Jelly Rolls 337 497 IPR014710 -
Lan1g0202 887 ProSiteProfiles Ankyrin repeat region circular profile. 649 680 - -
Lan1g0202 887 SUPERFAMILY Voltage-gated potassium channels 50 294 - -
Lan1g0202 887 Pfam KHA, dimerisation domain of potassium ion channel 804 866 IPR021789 -
Lan1g0202 887 Gene3D - 519 703 IPR036770 -
Lan1g0202 887 ProSiteProfiles Ankyrin repeat region circular profile. 584 611 - -
Lan1g0202 887 ProSiteProfiles Ankyrin repeat profile. 649 681 IPR002110 GO:0005515
Lan1g0202 887 SUPERFAMILY cAMP-binding domain-like 298 493 IPR018490 -
Lan1g0202 887 SMART ANK_2a 649 678 IPR002110 GO:0005515
Lan1g0202 887 SMART ANK_2a 615 644 IPR002110 GO:0005515
Lan1g0202 887 SMART ANK_2a 518 547 IPR002110 GO:0005515
Lan1g0202 887 SMART ANK_2a 584 613 IPR002110 GO:0005515
Lan1g0202 887 SMART ANK_2a 551 580 IPR002110 GO:0005515
Lan1g0202 887 CDD CAP_ED 373 478 IPR000595 -
Lan1g0202 887 ProSiteProfiles Ankyrin repeat region circular profile. 551 582 - -
Lan1g0202 887 ProSiteProfiles KHA domain profile. 804 884 IPR021789 -
Lan1g0202 887 Pfam Cyclic nucleotide-binding domain 393 478 IPR000595 -
Lan1g0202 887 PRINTS Ankyrin repeat signature 552 567 IPR002110 GO:0005515
Lan1g0202 887 PRINTS Ankyrin repeat signature 665 679 IPR002110 GO:0005515
Lan1g0202 887 Pfam Ankyrin repeats (3 copies) 623 698 IPR002110 GO:0005515
Lan1g0202 887 Pfam Ankyrin repeats (3 copies) 524 612 IPR002110 GO:0005515
Lan1g0202 887 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Lan1g0202 887 PRINTS EAG/ELK/ERG potassium channel family signature 68 75 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan1g0202 887 PRINTS EAG/ELK/ERG potassium channel family signature 91 101 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan1g0202 887 PRINTS EAG/ELK/ERG potassium channel family signature 102 111 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan1g0202 887 PRINTS EAG/ELK/ERG potassium channel family signature 241 258 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan1g0202 887 PRINTS EAG/ELK/ERG potassium channel family signature 267 278 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan1g0202 887 PRINTS EAG/ELK/ERG potassium channel family signature 285 294 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan1g0202 887 SMART cnmp_10 373 490 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0202 Lan-Chr1 1466549 1471997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0202 104 868 Ion Channels AT2G26650 70.000 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0202 K21867 - gmx:100819491 1453.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0202 1 1466549 1471997 Lan1g0202 1 1466549 1471997 ECH
Lan12g1188 12 18041500 18046654 Lan1g0202 1 1466549 1471997 LSH