Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0193 ATGGCTCTGATTATTTTCCTCTTCCTTTCCCTTCTTGAACTCAGTTTCCGAGTCAACTCGGACCCAACTCAGGACAAGCAAGCTCTCCTTGCTTTCATTTCCCAAACCCCACACGCTTCTCGTCTCAAATGGAACGCTTCTGACTCGGTTTGCAACTGGGTCGGTGTTCAATGTGACTCAACCACTTCCTACGTCTATTCACTCCGTTTACCCGCCGTTGGTCTCGTCGGTCCGGTCCCACCCAACACCATTGGCCGTTTAACTCACCTTCGAATCCTTAGTCTCCGTTCTAACGCCGTCACCGGTCAGATTCCCTCCGATTTCTCTAATCTCACTTTCCTTCGCAGCCTCTACCTTCAAAACAACGAGTTTTCCGGTGAGTTTCCGTCCTCTCTAACTCGCCTAACTCGTTTAACTCGCTTGGATCTCTCTTCTAACAACTTCACTGGCACAATTCCTTTCTCCGTCAACAACTTAACTCAACTAACCGGTCTTTTCTTGGAGAACAACACCTTCTCCGGTAAACTTCCGAGCATTACAACCAAATTGGTTAACTTCGACGTTTCAAATAACCGCTTAAACGGTTCAATTCCAGAAACACTCGCAAAATTCCCTTCGTCTTCTTTTGCTGGTAATTTAGATCTATGTGGTGGTCCGTTACAGCCGTGTAAATCGTTTTTTCCGGCACCTGCTCCGTCACCGGATTCGGATACAGTTCCGTCGAACGCGATACAGAAGAAGTCTAAGAAGCTTTCCACCGGCGCCATTATCGGAATTGTGGTAGGGTGTGTAGCGGGAGCGTTGTTATTGCTTCTGCTACTGTTGTTCTGTTTACGAAAGCGGCAGCGGCGGAAATCACCAAAGCCGCCGAAGTCAGTGACAACGGCGGCGCGTAGTGTGCCAACAGCAGAAGCAGGAACGTCGTCGTCGAAGGATGATATAACAGGTGGGTCAGGGGAGGGAGAGAGGAACAAGCTGGTGTTCTTGGAAGGAGGAATATACAGTTTCGATTTGGAAGATCTGCTTCGTGCTTCGGCGGAGGTATTAGGGAAAGGGAGCGTGGGGACTTCGTATAAGGCGGTGCTGGAGGAAGGGACGACGGTGGTGGTGAAGAGGTTGAAGGATGTGGTGGTTACGAAGAAAGAATTCGAGATGCAAATGGAAATGTTGGGAAAGATTAAACACCAAAATGTGGTTCCTCTTAGAGCGTTCTACTTCTCCAAAGATGAGAAATTACTTGTTTATGATTACATCACTGCTGGTAGCTTCTCTGCTCTTCTTCACGGGAGCAGAGGGTCTGGGAGAACGCCCTTGGACTGGGAGAACAGAATGAGAATAGCACTAGGGGCCGCAAGAGGGCTTGCATGCCTCCACGTATCAGGCAAGGTGGTCCACGGCAACATCAAATCTTCCAATATACTCCTCCAGGGGCCTGACAACCACGCAAGCGTTTCGGACTTTGGCCTCAACCCATTGTTTGGCACTGGTGCCCCAGCCAACCGCGTTGCGGGTTATCGGGCTCCTGAGGTATTAGAGACTCGGAAGGTGACCTTCAAGTCTGATGTCTACAGCTTGGGAGTATTGCTGTTGGAACTATTAACTGGGAAGGCACCAAACCAAGCTTCACTAGGTGAAGAGGGCATTGACCTCCCCAGGTGGGTCCAGTCTGTGGTTCGAGAAGAGTGGACTGCTGAGGTGTTCGATGCTGAGCTCATGAGGTTCCATAACATAGAAGAGGAAATGGTTCAGCTCTTGCAAATTGCAATGGCTTGTGTTTCGGTGGTGCCTGATCAAAGGCCAAACATGGAGGAGGTGGTGCGTATGATTGAGGACATGAATAGGGGGGACACTGATGAGGGTTTAAGACAGTCCTCTGATGACCCTTCTAAAGGATCTGAAGGTCACACCCCACCCACTGAGTCAAGGACACCACCTAGGTCCACACCTTAA 1950 0.4979 MALIIFLFLSLLELSFRVNSDPTQDKQALLAFISQTPHASRLKWNASDSVCNWVGVQCDSTTSYVYSLRLPAVGLVGPVPPNTIGRLTHLRILSLRSNAVTGQIPSDFSNLTFLRSLYLQNNEFSGEFPSSLTRLTRLTRLDLSSNNFTGTIPFSVNNLTQLTGLFLENNTFSGKLPSITTKLVNFDVSNNRLNGSIPETLAKFPSSSFAGNLDLCGGPLQPCKSFFPAPAPSPDSDTVPSNAIQKKSKKLSTGAIIGIVVGCVAGALLLLLLLLFCLRKRQRRKSPKPPKSVTTAARSVPTAEAGTSSSKDDITGGSGEGERNKLVFLEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEMLGKIKHQNVVPLRAFYFSKDEKLLVYDYITAGSFSALLHGSRGSGRTPLDWENRMRIALGAARGLACLHVSGKVVHGNIKSSNILLQGPDNHASVSDFGLNPLFGTGAPANRVAGYRAPEVLETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPNMEEVVRMIEDMNRGDTDEGLRQSSDDPSKGSEGHTPPTESRTPPRSTP* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0193 649 MobiDBLite consensus disorder prediction 285 318 - -
Lan1g0193 649 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Lan1g0193 649 SUPERFAMILY L domain-like 30 206 - -
Lan1g0193 649 PANTHER OS05G0588300 PROTEIN 7 630 - -
Lan1g0193 649 Pfam Leucine rich repeat N-terminal domain 23 59 IPR013210 -
Lan1g0193 649 ProSiteProfiles Protein kinase domain profile. 343 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0193 649 Gene3D Ribonuclease Inhibitor 182 223 IPR032675 -
Lan1g0193 649 MobiDBLite consensus disorder prediction 292 315 - -
Lan1g0193 649 MobiDBLite consensus disorder prediction 611 649 - -
Lan1g0193 649 Gene3D Transferase(Phosphotransferase) domain 1 419 630 - -
Lan1g0193 649 Gene3D Phosphorylase Kinase; domain 1 315 417 - -
Lan1g0193 649 MobiDBLite consensus disorder prediction 611 629 - -
Lan1g0193 649 Pfam Protein kinase domain 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0193 649 PANTHER OS05G0480400 PROTEIN 7 630 - -
Lan1g0193 649 SUPERFAMILY Protein kinase-like (PK-like) 347 612 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0193 Lan-Chr1 1392447 1396216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0193 2 630 Receptor kinase-like Gene Family AT5G58300 53.762 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan1g0193 Pkinase 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0193 - - gmx:100806857 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0193 1 1392447 1396216 Lan1g0193 1 1392447 1396216 ECH
Lan12g1192 12 18067409 18070835 Lan1g0193 1 1392447 1396216 LSH
Lan1g1101 1 21123979 21126891 Lan1g0193 1 1392447 1396216 LSH