Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0183 ATGTCATCAAGTGGAACCATTTGGAGCTATGAAGAAGAAAAAACATTTGAAAATGCTATAGCTATGCATTGGACTGAGGAAGAATCCAAAGAGCAATGGGAGAAGATTGCTTCAGAAGTTCCAAGCAAAAGCATGGAAGAAGTGAAACAACATTACAAAGTACTAGTTGAGGATGTTAGTGCAATAGAAGCAGGTCATATACCATTTCCAAATTATGCTGCAGATGAAACTAAGTCTTCAAGTAAGGATTTTCATGGCTCTTCCAAGGCTTCAAGTTCAGATAAGAGATCAAATTGTAATTTTGGAAGTGGGTTTTCTGGTCTAGGACATGACTCTGCCTCTCATAGTAGTGGTAAAGGAGGATTGTCAAGGTCATCAGAACAAGAAAGGAGAAAAGGAATTCCTTGGACAGAGGAAGAGCACAGGTTATTTTTACTTGGTCTAGACAAGTTTGGGAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTAATTTCTAGGACTCCAACTCAAGTGGCAAGCCATGCACAGAAGTACTTCATTCGATTGAACTCGATGAATAGGGATCGAAGGAGGTCGAGTATCCATGACATTACAAGTATCAACAATAGAGATGTGGCTAGTAATCAGGTACCAATTACAGGCCAGCATAGCAGCACAATGCCTTCAAGTACAGTGGCTGTAGGACAATCAGTGAAGCATAGAGCTCATCAGCCTCATCATATGCATGCCGGTTTAGGCATGTATGGAGCACCAGTTGGGCATCCTGTGGCTGCTCCTCATGGCCATATGGCATCTGCAGTTGGAACTCCTGTCATGCTTCCTCCCGGACCCCACCACCCGCATCCTCATGCTCATCCTCATCCATCTTATGTTGTCCCTCTTGCTTATCCAATGGCACCTCCAACAATGCACCAATAA 921 0.4311 MSSSGTIWSYEEEKTFENAIAMHWTEEESKEQWEKIASEVPSKSMEEVKQHYKVLVEDVSAIEAGHIPFPNYAADETKSSSKDFHGSSKASSSDKRSNCNFGSGFSGLGHDSASHSSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSINNRDVASNQVPITGQHSSTMPSSTVAVGQSVKHRAHQPHHMHAGLGMYGAPVGHPVAAPHGHMASAVGTPVMLPPGPHHPHPHAHPHPSYVVPLAYPMAPPTMHQ* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0183 306 Gene3D - 134 186 - -
Lan1g0183 306 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Lan1g0183 306 MobiDBLite consensus disorder prediction 75 96 - -
Lan1g0183 306 SMART sant 132 182 IPR001005 -
Lan1g0183 306 SMART sant 4 58 IPR001005 -
Lan1g0183 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 132 182 IPR006447 GO:0003677
Lan1g0183 306 CDD SANT 8 56 IPR001005 -
Lan1g0183 306 Gene3D - 1 69 - -
Lan1g0183 306 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Lan1g0183 306 ProSiteProfiles Myb-like domain profile. 8 56 IPR001005 -
Lan1g0183 306 PANTHER TRANSCRIPTION FACTOR KUA1 1 305 - -
Lan1g0183 306 SUPERFAMILY Homeodomain-like 6 61 IPR009057 -
Lan1g0183 306 SUPERFAMILY Homeodomain-like 130 185 IPR009057 -
Lan1g0183 306 ProSiteProfiles SANT domain profile. 3 60 IPR017884 -
Lan1g0183 306 CDD SANT 135 180 IPR001005 -
Lan1g0183 306 PANTHER TRANSCRIPTION FACTOR MYBS1 1 305 - -
Lan1g0183 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Lan1g0183 306 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Lan1g0183 306 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Lan1g0183 306 MobiDBLite consensus disorder prediction 110 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0183 Lan-Chr1 1299758 1301561 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan1g0183 Myb_DNA-binding 2.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0183 - - vun:114176836 499.59