Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0181 ATGTATTCCTCAAATAGCTCAATCAATGGCAATGACCTAATTCCATACCCCATTCAGTTTTACTCCTCTAGGCCTTTTTCCATTGAAAGCAACCCAACCTCAACACAATTAGAAACAACCAATTCATGTGATCTTCTTCTCTCTCCTCATCCTCCTTTGTCCTATTTTCAGTTCCCTTTTCCCTTTGAAGACCATGAAATTTTCCTTGAACAGCAACATCATCATGACTTACTTCATCACCAACATTCTCTAGCTGTTGAGATTGTTAATGATGTTAACATGGAGAATACTGGTATTATTCCTGATCATAAGGCAGGATTACAAGGTACGGATCCGCAGGTCCCAATAAGAAAATCTAGCAAGAGAGATCGGCATAGTAAGATCAATACGGCTAAAGGACTGAGAGATCGAAGAATGAGATTGTCTCTTTTAGTTGCAAAGAGGTTTTTCAGTTTGCAAGACATGCTAGGCTTTGACAAAGCCAGCAAAACTGTGGACTGGTTGCTGAATCAAGCAAAAGTTGAGATCAAGCAACTAGCAAGAGAAAAGAATATGCATCATCATCATCATGTCAATAGTGCATCTTCGACTTCGGAATGTACTGAAGCTATGTCAAGCTTGGATGAGATTGCAGTGAGTGGAAATCAAGAACAAGTTAAGGGAGCAACAAAGAGAAGAAGAATCAAGGTTTGTAGAAAGAGTGCTTTCAAGCATGTTGGTAAGGAATCAAGGGAAAAGGCAAGACAAAGAGCAAGAGAAAGGACTAGAGACAAGATGATGAAGACTAGGTTGCTAGTTGAAGCTCATGAATCAAAAAAACAATATAAAGAAGGAGCAATAAACAATAATCTTAATTGTCTATCTTCTTGGAATCCCTTTGAAATTGTTAAAGAGTGTGCAGGTACTCAGAGCCAAAGTGTTGATCCCTCCTTGGGTGTGATGAATGAAGCTGAAGAACGAAGCTCTCAAGGGAAGGAACATTTCGGAACTGAAGATAATATAGAGCATGAAGATTCTCTAGTGATCATGAGCAAATGGAGCCCAACCATGATTTTCAATTATTCTTTGAGTAACACAGGAATCCTTCAAGAGAATTTCAGTCCATGGGAAAACCTTGGGGGGCTTACAACAATCACAACATATCTAGTCTATGATCATGTTTGTATGTGA 1170 0.3897 MYSSNSSINGNDLIPYPIQFYSSRPFSIESNPTSTQLETTNSCDLLLSPHPPLSYFQFPFPFEDHEIFLEQQHHHDLLHHQHSLAVEIVNDVNMENTGIIPDHKAGLQGTDPQVPIRKSSKRDRHSKINTAKGLRDRRMRLSLLVAKRFFSLQDMLGFDKASKTVDWLLNQAKVEIKQLAREKNMHHHHHVNSASSTSECTEAMSSLDEIAVSGNQEQVKGATKRRRIKVCRKSAFKHVGKESREKARQRARERTRDKMMKTRLLVEAHESKKQYKEGAINNNLNCLSSWNPFEIVKECAGTQSQSVDPSLGVMNEAEERSSQGKEHFGTEDNIEHEDSLVIMSKWSPTMIFNYSLSNTGILQENFSPWENLGGLTTITTYLVYDHVCM* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0181 389 Pfam TCP family transcription factor 120 261 IPR017887 -
Lan1g0181 389 MobiDBLite consensus disorder prediction 100 125 - -
Lan1g0181 389 PANTHER TRANSCRIPTION FACTOR TCP18 48 350 - -
Lan1g0181 389 ProSiteProfiles TCP domain profile. 121 179 IPR017887 -
Lan1g0181 389 ProSiteProfiles R domain profile. 241 258 IPR017888 -
Lan1g0181 389 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 48 350 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0181 Lan-Chr1 1277928 1279989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0181 2 255 TCP Transcription Factor Family AT3G18550 34.843 4.38e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan1g0181 TCP 6.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0181 - - lang:109345082 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1201 12 18137977 18139913 Lan1g0181 1 1277928 1279989 LSH
Lan1g1092 1 21041304 21043279 Lan1g0181 1 1277928 1279989 LSH