Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0172 ATGATTGCTCTCTTCAAAGCCTCTTTCTTACTTTTCCTTTGCTTCTTTACCCTTTTCTGTGTAGTCAATTCCACTGATTTTGAAGTTGGTGGTAAAGATGGTTGGATTGTCCCTAACTCAAAGGACTATCATCAAATGTATAACCAGTGGGCGTCAAAAAACAGATTTAAAATTGGTGACACTATTTTTTTCAAGTACAAGAAAGACTCAGTTATGGGGGTGACAGAAAAAGAATATGAAAAATGCAGATCCTCACATCCTCACTTCTTCTCTAACAATGGTGACACTGTTTTCAAATTTGAGAGGCCAGGCTTGTTTTACTTCATTAGTGGTGTTAGTGGCCACTGTGACAGAGGGCAGAAGATGATTATTAAGGTATTGGATATAGTGTCAGCACCTCCACCAGAATCTCAATCTGCAAATGACACTGCAACCAAACCACATCATAAAGGTGCTGCTGCTGAAATAGCTCCTATGAGTATAACAACATTGGCACTTTCTGTTTTCTCATTCTTGGTTTTTCTTTTTGCTTGA 534 0.3839 MIALFKASFLLFLCFFTLFCVVNSTDFEVGGKDGWIVPNSKDYHQMYNQWASKNRFKIGDTIFFKYKKDSVMGVTEKEYEKCRSSHPHFFSNNGDTVFKFERPGLFYFISGVSGHCDRGQKMIIKVLDIVSAPPPESQSANDTATKPHHKGAAAEIAPMSITTLALSVFSFLVFLFA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0172 177 ProSiteProfiles Phytocyanin domain profile. 25 128 IPR003245 GO:0009055
Lan1g0172 177 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Lan1g0172 177 Pfam Plastocyanin-like domain 40 120 IPR003245 GO:0009055
Lan1g0172 177 CDD OsENODL1_like 25 127 IPR041846 -
Lan1g0172 177 PANTHER BLUE COPPER PROTEIN 4 142 IPR039391 GO:0009055
Lan1g0172 177 PANTHER EARLY NODULIN-LIKE PROTEIN 5 4 142 - -
Lan1g0172 177 Gene3D - 24 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0172 Lan-Chr1 1228176 1229388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0172 11 172 Phytocyanin Superfamily AT1G48940 50.296 3.74e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0172 - - lang:109345045 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1207 12 18166316 18167746 Lan1g0172 1 1228176 1229388 LSH