Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0168 ATGGAGCCCATGGACATTGTTGGAAAATCGAAGGAAGATGCTTCGCTTCCGAAAGCTACTATGACAAAAATTATTAAAGAGATGTTGCCCCCAGATGTACGTGTTGCAAGGGATGCTCAAGATCTATTGATTGAGTGTTGTGTAGAGTTTATTAATCTAGTCTCATCGGAGTCCAATGAAGTCTGTAACAGAGAAGATAAAAGGACTATTGCACCTGAGCACATATTGAAGGCTTTGGAGGTGCTTGGATTTAGTGAGTACATCCAAGAAGTTTATTCTGCGTACGAACAGCACAAGCTGGAGACCATGCAAGACACTTTAAAAGCGGGTAAGTGGAGCAATGTAGCTGAAATGAGCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCACGAGCTAGGATGAACGGTGGGGCTGTTGCTCCAAAGCAGCAGCCAGAAGGTGACCAAAGTTTAGATAGCTAA 474 0.4409 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHILKALEVLGFSEYIQEVYSAYEQHKLETMQDTLKAGKWSNVAEMSEEEALAEQQRMFAEARARMNGGAVAPKQQPEGDQSLDS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0168 157 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
Lan1g0168 157 MobiDBLite consensus disorder prediction 137 157 - -
Lan1g0168 157 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Lan1g0168 157 Gene3D Histone, subunit A 4 143 IPR009072 GO:0046982
Lan1g0168 157 Coils Coil 115 135 - -
Lan1g0168 157 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0168 Lan-Chr1 1207655 1210974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0168 1 153 CCAAT-DR1 Transcription Factor Family AT5G23090 82.468 2.87e-93 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lan1g0168 CBFD_NFYB_HMF 1.7e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0168 K21751 - tcc:18604965 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1211 12 18178767 18181889 Lan1g0168 1 1207655 1210974 LSH