Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0167 ATGAGTGATGGAAGGAAGAGGAGGAGGTTCCACTTGGGAAAAATCCATGCATTCTCACGAGGGAAAGCAGTGAAAGAAGAACAATCACTTATAGGAGGTCCTGGCTTCTCAAGAAAACTATATATCAATGACCCTGAAAGGGTTGAGTCAAATCTTGTGAACTATGGTGATAATTATGTTAGGACTACTAAATATACATTGGCCACTTTTATTCCCAAGTCCTTGTTTGAACAATTTAGGAGGGTTGCAAATTTCTACTTTCTTGTGGTAGCAATCTTGTCTTTCTTACCTGTTTCTCCATATTCAGCTGTCAGTAATGTTGTTCCTCTAGTGTTTGTGGTTGCTGTTTCCATGGGGAAAGAGTTACTCGAAGATTGGAAGCGAAAAACTCAGGATATAGAGATGAATAACAGAAAGGTCAAAGTACATCGCGGAGGTGGTGTTTTTGACCTGTCTAAATGGAGGGATTTGAGAGTCGGAGACATCGTGAAGGTTGAAAAGGATGAATTTTTCCCTGCGGATCTCATCTTACTTTCATCAAGTTATGACTATGCGGTTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTTAAGCTGAAACAAGCACTGGAAGGAACTTCAAAGTTTCAAGAAGACTCAAGCTTCGGAAATTTCAAGGCTGTCATTAGATGTGAAGATCCGAATGCAAATTTGTACGCGTTTGTAGGCAGTCTGGACCACGAGGACCAGCAGAGTCCTCTTACGCCTCAGCAGCTACTGCTTAGGGACTCCAAGCTGAGGAATACAGATTTTATCTATGGTGTGGTAATATTTACTGGTCATGATACAAAGGTTATGCAGAATTCAACAGAGCCTCCATCCAAGAGAAGCAAAATTGAGAAACGGATGGATAAGGTTATCTACTGCTTGTTCTTTCTATTAGTTTTGATTTCCTTTATTGGCTCCATATTCTTTGGGATTTCAACAAAGGATGACCTTGAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGACGATTCCACAATCTACTACGACCCAAAGAACGCGGTAGTTGCAGCACTTCTGCACTTCTTGACGGCGGTTATGTTGTATGGTTATTTCATTCCAATTTCCTTGTATGTCTCAATTGAAATTGTGAAAGTCCTTCAAAGCATTTTCATCAACCAGGATATTCACATGTATTATGTGGAAACCGACCAGCCAGCGCATGCTCGTACGTCAAATTTGAACGAGGAACTTGGGCAAGTTGAGACCATACTTTCAGATAAGACAGGAACCTTGACTTGCAACTCAATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGACGAGTACCTACAGAAGTTGAGAGAGCTCTATCCAGTAGAAAAGATTCACCTATTGGTCAAAAGTTGGAACAAGGCAACGTTGTTGCAAAGTCAACTGTTAAAGGGTTTAACTTTCAGGATGAAAGGATCATGAATGGAAATTGGGTCAGAGAACCCAATGCCAATGTAATACAGAACTTCCTACGGTTGTTGGCTGTGTGCCATACTGCAGTACCTGAAGTTGATGAGAAAACTGGTAAAGTCTCATATGAAGCTGAATCACCAGATGAGGTAGCTTTTGTGGTCGCAGCCAGAGAACTCGGGTTCGAGTTTTATGAAAGGACACACACAACTACTTCATTGCGTGAGTTAAATCCCAAATCTGCCAACAAAACTCAAAGGTCCTACAAACTTTTAAATACAATAGAATTTAGTAGTGCTAGAAAGCGGATGTCTGTCATTGTAAGAGATGAGGAGGGGAAAATCCTACTACTTAGCAAAGGCGCTGACAATGTCATGTTTGAACGCCTAGCAAAGAACGGAAGGGAGTTTGAAGAAAAGACTAAGCAACACATAAGTGAATATGCTGATTCTGGTTTGAGGACCTTAATACTTGCATACCGTGAACTTGATGACGTAGAGTACAATAAATTTAATAAAGAATTCACAGAGGCAAAGAACTTAGTGAGTGCAGATCAGGAGCATATTCTAGAGGAAATATCACAAAATATTGAGAAGGACTTGATTCTTCTTGGAGCTACTGCTGTTGAAGACAAACTTCAAAACGGGGTTCCTGAGTGCATTGACAAGCTGGCACAGGCTGGGATCAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACGGCTATCAACATCGGATTTGCTTGTAGTTTACTTAGACAAGGAATGAAACAGATTATAATTAGCTCAGACACTCCAGAAATTAAATCCCTGGAGAACATGGAGGATAAGTCTGCTGCTGAAAAGGCAATCAAGGCAAGTGTTCTTCGTGAAATAAAGAACGGAAAGGCTTTAATATCTACACCAGATGAAAACTCTGATGCATTTGCTCTAATCATTGACGGGAAGTCTCTTACCTATGCACTAGAAGATGATGTCAAGGACTTGTTTCTTGAACTTGCTGTTGGCTGTGCATCTGTTATATGCTGCCGTTCATCTCCCAAGCAGAAAGCACTTGTTACTAGACTGGTGAAGATCAAAACTGGAAAGACAACTCTAGCGATCGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTTGAAGGAATGCAGGCTGTCATGTCAAGTGATATTGCAATTGCCCAATTTCGGTTTCTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGCTACAGAAGGATCTCATCAATGATCTGTTACTTCTTTTACAAGAATATTGCTTTTGGCTTCACTCTATTCTTCTACGAGATGTATGCATCATTCTCAGGGCAACCTGCATACAATGATTGGTGCATGTCACTATATAACGTATTCTTCACTTCGCTTCCGGTAATTGCTTTGGGAGTGTTTGACCAGGATGTCTCTTCTAAATTATGTCACAAGTTTCCATTGTTATATGAAGAAGGATTGCGAAATGTCCTATTTAGCTGGAAAAGAATAATTGGTTGGGCATTCAATGGGGCTGTGAGTGCTGCAATTATATTCTTCTTTTGCATTCGCGCGATGGAGCATCAGGCATTCCGTAAAGGCGGAGAAGTTGTTGGACTGGAAGTCCTCGGCACCACCATGTACACTTGTCTTGTGTGGGTAGTGAATTGCCAGATGGCATTATCTATCAGTTACTTCACTTACATACAACATATATTCATCTGGGGAAGCATTATATTCTGGTACATATTCCTCATGATATATGGAGCCATCGACCCGTCCTTTTCAACCACTGCTTATGAGGTCTTCATTGAAGCTCTTGCTCCAGCACCATCTTTCTGGGTCATCACTTTACTTGTCACTATTGCTTCCGTTCTTCCATATTTTGCCTATGCTTCCATCCAATCCCGTTTCTTCCCTGTGTATCATCAAATGATACAATGGATGAAGAAAGATGGGCAAATAAATGATCCAGAATTCTGTAACATGGTGCGCCAGAAATCTATACGAAACACAACAGTTGGATTCACAGCTCGTTTGCAAGCATCCAGGCGTTTGGAAGCATCTCGGCGTTTGGAAGCATCCAGGCGTATGGAAGTATCCTTTGAAGTGACATCCGAGAGCAGATAA 3615 0.4122 MSDGRKRRRFHLGKIHAFSRGKAVKEEQSLIGGPGFSRKLYINDPERVESNLVNYGDNYVRTTKYTLATFIPKSLFEQFRRVANFYFLVVAILSFLPVSPYSAVSNVVPLVFVVAVSMGKELLEDWKRKTQDIEMNNRKVKVHRGGGVFDLSKWRDLRVGDIVKVEKDEFFPADLILLSSSYDYAVCYVETMNLDGETNLKLKQALEGTSKFQEDSSFGNFKAVIRCEDPNANLYAFVGSLDHEDQQSPLTPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSKIEKRMDKVIYCLFFLLVLISFIGSIFFGISTKDDLENGRMKRWYLRPDDSTIYYDPKNAVVAALLHFLTAVMLYGYFIPISLYVSIEIVKVLQSIFINQDIHMYYVETDQPAHARTSNLNEELGQVETILSDKTGTLTCNSMEFIKCSIAGVAYGRVPTEVERALSSRKDSPIGQKLEQGNVVAKSTVKGFNFQDERIMNGNWVREPNANVIQNFLRLLAVCHTAVPEVDEKTGKVSYEAESPDEVAFVVAARELGFEFYERTHTTTSLRELNPKSANKTQRSYKLLNTIEFSSARKRMSVIVRDEEGKILLLSKGADNVMFERLAKNGREFEEKTKQHISEYADSGLRTLILAYRELDDVEYNKFNKEFTEAKNLVSADQEHILEEISQNIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLENMEDKSAAEKAIKASVLREIKNGKALISTPDENSDAFALIIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKIKTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEMYASFSGQPAYNDWCMSLYNVFFTSLPVIALGVFDQDVSSKLCHKFPLLYEEGLRNVLFSWKRIIGWAFNGAVSAAIIFFFCIRAMEHQAFRKGGEVVGLEVLGTTMYTCLVWVVNCQMALSISYFTYIQHIFIWGSIIFWYIFLMIYGAIDPSFSTTAYEVFIEALAPAPSFWVITLLVTIASVLPYFAYASIQSRFFPVYHQMIQWMKKDGQINDPEFCNMVRQKSIRNTTVGFTARLQASRRLEASRRLEASRRMEVSFEVTSESR* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0167 1204 Pfam Phospholipid-translocating ATPase N-terminal 41 105 IPR032631 -
Lan1g0167 1204 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1142 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan1g0167 1204 Pfam Phospholipid-translocating P-type ATPase C-terminal 885 1135 IPR032630 -
Lan1g0167 1204 SFLD p-type atpase 406 908 IPR044492 -
Lan1g0167 1204 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lan1g0167 1204 PRINTS P-type cation-transporting ATPase superfamily signature 743 753 - -
Lan1g0167 1204 PRINTS P-type cation-transporting ATPase superfamily signature 857 876 - -
Lan1g0167 1204 Pfam Cation transport ATPase (P-type) 515 619 - -
Lan1g0167 1204 SUPERFAMILY HAD-like 419 912 IPR036412 -
Lan1g0167 1204 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lan1g0167 1204 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Lan1g0167 1204 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 824 939 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan1g0167 1204 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 1180 - -
Lan1g0167 1204 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 492 694 IPR023299 GO:0000166
Lan1g0167 1204 Gene3D - 120 286 - -
Lan1g0167 1204 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1180 - -
Lan1g0167 1204 Gene3D - 694 897 IPR023214 -
Lan1g0167 1204 Gene3D - 559 693 IPR023299 GO:0000166
Lan1g0167 1204 SFLD C1.7: P-type atpase like 406 908 - -
Lan1g0167 1204 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1135 IPR023298 -
Lan1g0167 1204 CDD P-type_ATPase_APLT_Dnf-like 57 1017 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0167 Lan-Chr1 1187385 1193230 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0167 10 1180 Primary Pumps ATPases AT1G68710 68.020 0.0 1743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0167 K01530 K14802 gmx:100799312 1995.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1087 1 20979482 20985677 Lan1g0167 1 1187385 1193230 LSH