Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0161 ATGGAGATTTCTGCTATGGCTTCAACCACTCCTTCTTCCACTTCACATCACACACTCAAAACCTTTTGCAAACCTCAACTGAAACGCACCAATATCTCACTCCCAACCTCAACCACCATTTCACTTCTCACTATCTTCTCCCCTCCCTTTGAAGCCAAGGCCATTTCCAAGGATCAGATTATCTCTTCTCTAAACCAAGCTGAGAAAACAATCGATCAGGTTCAGGAAGCGGGTTCGAGTTTTTTGGACACATCACAGCATGTTTTTGAAGCTATAGGGAATGCTTTGAAGCCTTGGATCGAAACGGGTTTGCCGTATGTGCAGCAGGCAGGGGAAGAGGCTTTGAAAGTTGCTTCACCGGTCATCTCAGAGGTTACAAAGAAGGCACAAGAAGCACTCCAAAGCTCTGGTGTTGATACTCAACCTGTTCTCAAGACCGTGGCAGATGCTGCACAACAAACGACCAATGTGATTGAAGGTGCCAAGCCAATAGCTTCAACAACCATTGAAACCATATCTACTTCAGACCCTACTGTGATTGCTGGAACAGCTGGAGCACTCTTTATTGCATACCTTTTGTTCCCTCCTATCTTCTCTGCCATCTCGTTTAATTTCCGTGGTTACAAAGGTGAACTTACTCCAGCTCAAACACTTGATCTAATATCTACACGAAACTACATTTTGGTTGATATCAGGTCAGAGAAAGACAAGGACAAGGCTGGTATCCCTCGACTTCCCTCCAGTGCTAAAAATAAGTTGATTGCAATTCCTTTGGAAGAACTTCCAAGCAAGATCAAAGGACTGGTGAGGAATGTGAAGAAAGTGGAAGGTGAAATAGCAGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACCAATGTTGTGATCTTGGACTCGTACTCGGATTCGGCTAAAATAGTTGCAAGAACACTAACCAGCCTTGGTTTTAAGAACAGTTGGATTGTTGCTGATGGTTTTTCCGGGGGCAGAGGGTGGTTACAAAGTAGGCTAGGAACAGATTCATATAATTTTTCATTTGCAGAGGTTTTATCACCATCCAGAATCATTCCTGCTGCTGTTAGAAATTTTGGCACAACAAGCCAATCTAGTAGGAAACTTCTGCCTGGAGCAGACTGA 1143 0.4348 MEISAMASTTPSSTSHHTLKTFCKPQLKRTNISLPTSTTISLLTIFSPPFEAKAISKDQIISSLNQAEKTIDQVQEAGSSFLDTSQHVFEAIGNALKPWIETGLPYVQQAGEEALKVASPVISEVTKKAQEALQSSGVDTQPVLKTVADAAQQTTNVIEGAKPIASTTIETISTSDPTVIAGTAGALFIAYLLFPPIFSAISFNFRGYKGELTPAQTLDLISTRNYILVDIRSEKDKDKAGIPRLPSSAKNKLIAIPLEELPSKIKGLVRNVKKVEGEIAALKISYLKKINKGTNVVILDSYSDSAKIVARTLTSLGFKNSWIVADGFSGGRGWLQSRLGTDSYNFSFAEVLSPSRIIPAAVRNFGTTSQSSRKLLPGAD* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0161 380 Coils Coil 57 77 - -
Lan1g0161 380 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 378 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lan1g0161 380 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 188 330 IPR036873 -
Lan1g0161 380 SMART rhod_4 212 340 IPR001763 -
Lan1g0161 380 CDD RHOD 216 330 - -
Lan1g0161 380 Gene3D - 210 348 IPR036873 -
Lan1g0161 380 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 3 378 - -
Lan1g0161 380 ProSiteProfiles Rhodanese domain profile. 222 343 IPR001763 -
Lan1g0161 380 Pfam Rhodanese-like domain 214 329 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0161 Lan-Chr1 1175362 1178285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0161 9 301 Sulfurtransferasese or Rhodanese AT5G23060 66.333 5.57e-143 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0161 - - adu:107469155 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1213 12 18190909 18193585 Lan1g0161 1 1175362 1178285 LSH