Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0155 ATGGGTGGTAGCGACAGCGAGGTAGAGAAGAAAAAGGTGCTTGCTTTGGCTCCTATTGCTAAACCCCTCGCTGGGAAGAAGCTTTCAAAGCACACTCTTAAGCTTGTTCGTAAAGCTGCACAACACAAGTGCTTAAAGAGAGGTGTCAAAGAGGTTGTTAAAAGCATAAGGCGTGGTCATAAAGGGTTATGTGTTATTGCTGGGAATATATCTCCAATTGATGTCATCACTCATGTTCCTATATTGTGTGAAGAGTCTGAAATTCCCTATGTATATGTTCAGTCTAAAGAAGACCTTGCAACTGCAGGAGCAACAAAGAGGCCTACTTGCTGTGTTTTGGTTATGACCAAGCCTACAAAGGGTGATCTAGATCAAGGGGAACAAGAGAAACTAAAGTCAGATTATGATCAAGTTGCAGCGGAAATTACTGAGATTACAGCTTCACTTTTTTGA 453 0.4172 MGGSDSEVEKKKVLALAPIAKPLAGKKLSKHTLKLVRKAAQHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESEIPYVYVQSKEDLATAGATKRPTCCVLVMTKPTKGDLDQGEQEKLKSDYDQVAAEITEITASLF* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0155 150 PRINTS High mobility group-like nuclear protein signature 18 31 IPR002415 GO:0003723|GO:0005730
Lan1g0155 150 PRINTS High mobility group-like nuclear protein signature 31 46 IPR002415 GO:0003723|GO:0005730
Lan1g0155 150 PRINTS High mobility group-like nuclear protein signature 48 58 IPR002415 GO:0003723|GO:0005730
Lan1g0155 150 PRINTS High mobility group-like nuclear protein signature 92 104 IPR002415 GO:0003723|GO:0005730
Lan1g0155 150 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 6 149 - -
Lan1g0155 150 PRINTS Ribosomal protein L7A/RS6 family signature 45 59 IPR018492 -
Lan1g0155 150 PRINTS Ribosomal protein L7A/RS6 family signature 64 77 IPR018492 -
Lan1g0155 150 PRINTS Ribosomal protein L7A/RS6 family signature 80 90 IPR018492 -
Lan1g0155 150 PRINTS Ribosomal protein L7A/RS6 family signature 90 104 IPR018492 -
Lan1g0155 150 Gene3D - 11 146 IPR029064 -
Lan1g0155 150 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 34 116 IPR004038 -
Lan1g0155 150 PANTHER - 6 149 - -
Lan1g0155 150 SUPERFAMILY L30e-like 11 119 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0155 Lan-Chr1 1155082 1156154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0155 45 117 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 31.507 8.10e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0155 K11129 - gmx:100305515 257.684