Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0137 ATGGAATCTTGGAGTTATGTTTCTGAAGAAAAGGGGTATGGCTCAAATGACACTCTCTCTCCACCTACTACCTTTGGTAGGAGTAAAAGTTCAATCTTGGGATGGGAACTGAAAACCCCATGTAGCTTTTCTAATGATTTGTTAGCCTTAGGTCATCAAAACATTGATAATCAAGGTTTTGAGGATTTGGGGTATCCTGAAATGTTGGGGAAGAACTTATATGATGATCTGGATGGTGGACATGGTTCTAGAATCACTGGTACTACTACTGTTATGGCTGCTACCCCAAATCCATTTTCTGCAAGAGGGGACTGCAATTTCAGGCTTCCAAACTCTAATGGTAGCGATTCGTTCATTGATTTGAAGCTGGGACGATTTATTGATCATGGGGAAGCAATTGATGCAGCATTTTCCAAAGGTGCACCAATTATGTCATCTTCGGAGTCATCGACGCCCTCCAAGCGAGTAAGGGCTTCGGGATTGCGCTCGCAGACCGCGTACTGCCAAGTCTATGGCTGTAACAAGGATCTCAGTTCCTGTAAGGATTACCACAAGAGGCATAGAGTTTGTGAGGTTCACTCTAAGACTGCTATAGTTATAGTGAATGGCATTGAGCAAAGGTTTTGTCAGCAATGTAGTAGGTTTCACTTGCTGGCAGAATTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGCCATAATGAGCGTCGAAGAAAACCACAAATGGGTATTCATTCTGGAAAGGCTGGGAGGTTGCTTCAGCCATGTGGTGATAGCAGATTCCAGGGGACCATGCTAACATCAGCATCTTATATCTGCCCAGATATGCTCCCTAGTCGGGTCATGCCTTCTGAGAAATATGAAATGAGTGGCTTCTGGAGACCTAATAAAGCAGAACATGGGACAGGTTTTAGGCATCTTTCTTCTCTACCTAGCTCCAATGGATATTCTCAGTCAAGATCCCTATTTCCTTCGTATAACCAAAAACAGTTTCCTTTTCTTCATGAAAATGGTGCTACATCCACTACAAGCGTCTTCTGTGACAACAATATCCAATATCCACCTGTCCTTGGGGCCCAAAATTCTCGGTCAAAATCAGTATACTACCAGGATAGTTCCTTAAGAAGTGAGGACTTCAATGTTTTTGATACAACATCAACTGTTCAAGGACTATCAGGAATTTCAGACTCTTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCATCAAGCCAATCATCTGAAATTCCCTTGTCTCACTCTTTGGTTTTTCCAAACAGCCATAGTCATCACTACAACATTAGTCAGGTCTCTGAGAAGGTCGGAATAAGCTCACTGACGTCTTCAAGCCAGGTGTCAGATAGGTTTCCATCAGAAATGAATCCTGTGGATGGAAATCATATTAATCCTGTGCTGATACCAGACAATGATGCTGATATTGTAAACTTTGAAATGGCCGATGAGATTTTCCAAGGTTCAGATTTTCTGAATGTGAAAGACCGTCTTTCTTGTGAAGATGGCACAACCATTGACTTGCTACAACTGTCGTCGCAGCTTCAGCGTGTTGAGCACCACAGGCAATCCTTGCAGGTGAAGCAAGAAAATGATTCTTTTTGCACTCTCCGGATTACTTAA 1644 0.43 MESWSYVSEEKGYGSNDTLSPPTTFGRSKSSILGWELKTPCSFSNDLLALGHQNIDNQGFEDLGYPEMLGKNLYDDLDGGHGSRITGTTTVMAATPNPFSARGDCNFRLPNSNGSDSFIDLKLGRFIDHGEAIDAAFSKGAPIMSSSESSTPSKRVRASGLRSQTAYCQVYGCNKDLSSCKDYHKRHRVCEVHSKTAIVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMGIHSGKAGRLLQPCGDSRFQGTMLTSASYICPDMLPSRVMPSEKYEMSGFWRPNKAEHGTGFRHLSSLPSSNGYSQSRSLFPSYNQKQFPFLHENGATSTTSVFCDNNIQYPPVLGAQNSRSKSVYYQDSSLRSEDFNVFDTTSTVQGLSGISDSCALSLLSSQSQNSSSQSSEIPLSHSLVFPNSHSHHYNISQVSEKVGISSLTSSSQVSDRFPSEMNPVDGNHINPVLIPDNDADIVNFEMADEIFQGSDFLNVKDRLSCEDGTTIDLLQLSSQLQRVEHHRQSLQVKQENDSFCTLRIT* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0137 547 ProSiteProfiles Zinc finger SBP-type profile. 165 242 IPR004333 GO:0003677
Lan1g0137 547 Pfam SBP domain 168 241 IPR004333 GO:0003677
Lan1g0137 547 Gene3D - 159 229 IPR036893 GO:0003677|GO:0005634
Lan1g0137 547 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 43 547 IPR044817 GO:0003677
Lan1g0137 547 MobiDBLite consensus disorder prediction 1 22 - -
Lan1g0137 547 PANTHER 1 PROTEIN, PUTATIVE-RELATED 43 547 - -
Lan1g0137 547 SUPERFAMILY SBT domain 166 246 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0137 Lan-Chr1 1007990 1011923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0137 119 284 SBP-box Gene Family AT1G69170 56.627 5.68e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan1g0137 SBP 5.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0137 - - gmx:100817547 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1070 1 20861299 20865019 Lan1g0137 1 1007990 1011923 LSH