Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0134 ATGAGGGAATCAAGAACTGAAAAAGCTCCTCTCTTAGAAGCTGAGCGTGTTGAAGGGGGAAAGAGGGATGATGCCCCTGCAGGTCAAGTCTCAGACCTTGAGCACGGTGATGCAGTGCCGGCGGCAAATGTGGGATTTTTTCGAGTGTTTTCACTTGCAAAGCCTGAGGCTGGAAAGTTGGTGATTGGTACAGTGGCCCTGTTGATTGCAGCCACAACAAGTATCTTAGTTCAAAAATTTGGTGGGAAGATAATTGACATTGTCTCAAGAGATCTTCGAACACCTGAAGAGAAAGACAAAGCTTTAAATGCTGTTAAGGGCACAATTCTAGAGATATTTCTGATTGTTATTGTTGGTTCTGTTTGCTCAGCACTTCGAGCTTGGCTTTTTTCTTCTGCTAGTGAAAGGGTTGTTGCACGACTGAGAAAGAATTTGTTCAGTCACCTTGTAAACCAGGAAATAGCCTTCTTTGATGTTACTCGTACCGGGGAACTTTTAAGTAGGCTATCAGAAGATACGCAGATCATTAAGAATGCTGCAACTACCAATCTTTCCGAGGCACTCAGAAACTTATCAACAGCACTTATTGGTCTCAGCTTCATGTTTGCAACATCATGGGAGTTAACATTGTTGGCTTTGGCTGTCGTGCCTGTTATTTCTGTTGCTGTTCGCAAATTTGGTCGTTTCCTACGTGAACTTTCTCATAAAACTCAAGCTGCAGCTGCAGTAGCTTCTTCAATTGCTGAGGAATCTTTTGGTGCTATAAGGACAGTAAGATCTTTCGCTCAAGAGGATTATGAAATATCGCGCTACTCTGAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAGCAAGCTAAAGTCGTTGGACTCTTTTCTGGAGGCCTTAATGCAGCATCTACACTTTCAGTTATTGTAGTTGTTATATATGGAGCTAATTTGACAATCAAAGGTTCCATGACCTCGGGTGATCTTACGTCTTTCATTCTTTATAGTCTCTCAGTGGGATCTTCTATATCTGGTCTGTCAGGATTGTATACGGTAGTTATGAAAGCTGCAGGTGCTAGCAGAAGGGTATTTCAAATTATGGATCGAATTTCATCTATGCCGAAGTCTGGAAATAAGTGTCCTCTGGGTGATCAAGATGGGGAAGTGGAACTAGATGATGTATGGTTTTCCTATCCATCACGCCCTAATCATATGGTGCTCAAGGGCATTACAATGAAACTGCGGCCTGGCTCAAAGGTTGCTCTTGTTGGTCCTAGTGGTGGCGGAAAGACTACCATAGCCAACTTAATTGAAAGATTTTATGACCCAACCAAGGGAAATATTCTGGTGAATGGGGTTCCTCTGGTTGAAATATCACACAAGCATTTACACATAAAGATAAGCATAGTGAGTCAGGAGCCTACACTCTTCAACTGTTCCATAGAGGAGAACATAGCTTACGGATTTGATGGCAAAGTTAACACTGTTGATATAGAAAATGCAGCGAAAATGGCCAATGCACATGAATTTATATCAAAATTCCCAGAGAAATACCAGACTTTTGTTGGAGAGCGCGGGGTAAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCTAGAGCTCTGCTTATGGACCCCAAAATTCTCCTTCTCGATGAAGCCACCAGCGCCTTAGATGCTGAAAGTGAATACCTAGTACAGGATGCCATGGATTCTCTTATGAAGGGAAGGACAGTTCTAGTTATTGCTCATCGGTTATCAACAGTTAAAACTGCCGATACTGTTGCGGTTGTTTCAGATGGACAAGTAGTTGAAAAGGGCACTCATGATGAGCTTCTGAGCAAGGATGGTGTCTATACTGCATTAGTCAGAAGACAACTACAAACAGCAAAATCTGAATCAATCTGA 1899 0.4239 MRESRTEKAPLLEAERVEGGKRDDAPAGQVSDLEHGDAVPAANVGFFRVFSLAKPEAGKLVIGTVALLIAATTSILVQKFGGKIIDIVSRDLRTPEEKDKALNAVKGTILEIFLIVIVGSVCSALRAWLFSSASERVVARLRKNLFSHLVNQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTALIGLSFMFATSWELTLLALAVVPVISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAIRTVRSFAQEDYEISRYSEKVDETLKLGLKQAKVVGLFSGGLNAASTLSVIVVVIYGANLTIKGSMTSGDLTSFILYSLSVGSSISGLSGLYTVVMKAAGASRRVFQIMDRISSMPKSGNKCPLGDQDGEVELDDVWFSYPSRPNHMVLKGITMKLRPGSKVALVGPSGGGKTTIANLIERFYDPTKGNILVNGVPLVEISHKHLHIKISIVSQEPTLFNCSIEENIAYGFDGKVNTVDIENAAKMANAHEFISKFPEKYQTFVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKTADTVAVVSDGQVVEKGTHDELLSKDGVYTALVRRQLQTAKSESI* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0134 632 Pfam ABC transporter transmembrane region 60 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan1g0134 632 MobiDBLite consensus disorder prediction 1 30 - -
Lan1g0134 632 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 61 351 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan1g0134 632 CDD ABC_MTABC3_MDL1_MDL2 385 623 - -
Lan1g0134 632 Gene3D ABC transporter type 1, transmembrane domain 37 366 IPR036640 GO:0005524|GO:0016021
Lan1g0134 632 SMART AAA_5 412 605 IPR003593 -
Lan1g0134 632 CDD ABC_6TM_AtABCB27_like 63 359 - -
Lan1g0134 632 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 4 627 - -
Lan1g0134 632 Gene3D - 379 628 IPR027417 -
Lan1g0134 632 Pfam ABC transporter 403 553 IPR003439 GO:0005524
Lan1g0134 632 ProSitePatterns ABC transporters family signature. 525 539 IPR017871 GO:0005524
Lan1g0134 632 PIRSF ABC_prm/ATPase_B 5 632 - -
Lan1g0134 632 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 4 627 IPR039421 -
Lan1g0134 632 SUPERFAMILY ABC transporter transmembrane region 48 364 IPR036640 GO:0005524|GO:0016021
Lan1g0134 632 MobiDBLite consensus disorder prediction 1 32 - -
Lan1g0134 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 623 IPR027417 -
Lan1g0134 632 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 622 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0134 Lan-Chr1 984408 989849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0134 113 623 Calmodulin-binding Proteins AT2G36910 40.462 3.84e-104 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0134 - - gmx:100810510 1072.38