Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0131 ATGATGATTGAAAATTCAAGTAAAGGTTATGAAGCCAAGAGAGAGGGTGATACTACTAATAATGAGAAGTTGTCAATGGCACCATCTACTACTTCAACCTCTTCAAGACAATGGGCAGCATTCAGAAATCCAAGAATAGTGAGAGTGTCGCGTGCTTTGGGAGGAAAAGATAGGCATAGCAAGGTTTGCACCATAAGGGGGTTGAGGGACAGAAGGATTAGGCTTTCTGTGCCAACAGCAATTCAGTTATATGATCTTCAAGACAGGCTTGGTCTCAGCCAACCTAGCAAAGTCATTGATTGGTTGATTGAAGCCTCAAAACTTGATATTGATAAGCTTCCTCCACTTCAAATCCCTCATGGTTTCCCTCAATTTCATCATCAACAAACCCTATTGCCTTATCAACATCATGAATCAACTCCCTATCATCATCATCATCACTTTTCTCTTGGAGGCTTCTATGATGCTAATCTTTCAACAATCATGAAAGATGGTGGAAATCATCAAAATCTCTTGCCAAAGTCAAGGTTGAATTGGGATTTAGATTCAGAACATTCAAGAATGAAGGGCAAGGAAGCTGAAAGTGTAATGTCCAATATCTCACAAAAAGGAAAGTGGATCAAAACTGGTAGTGAACAAGAAAACCAAGATGGAATTGATGGTTATAATAGACAGAAAGTTTTCCCTGGTTTATTAAACAACGCAATGGCATATGACTCATACCATTCCGAGCCTTCAAGTTTATCTTTGTCCCAATTTGGAGGCCACGGATCATTGTTTCCTTCCCATGTAGATCCTCATCAAAACAGTGGCAGTGGCAGTGTGCAATTTTCATCTTCTAATGTGGCTGTGCCATCAGGTTCTCAATTACTTTTTTCTCCATCTTCAGCTACACCATCACTTTTCACTCCCTATGCTCCATTTATGGCCAACTCATCAGTGGACAATGATCCAAGACAATTCAACCATGTTCAGATCTTGAGCTCATCAAGTAATAATTCACAAGTCATGCAGCCTCATCCTCTCATTCAGTCTTTTCATTCACTCAGTTCACCTCTCAGACGCCTTCCGTTACCATTCAATTCCAAGCTTCTAGACTCAGACAACAACAACAATCGTAGCCAACCAAATAAGGGAAGTGGTTCTCCTTCTTGA 1155 0.4043 MMIENSSKGYEAKREGDTTNNEKLSMAPSTTSTSSRQWAAFRNPRIVRVSRALGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLIEASKLDIDKLPPLQIPHGFPQFHHQQTLLPYQHHESTPYHHHHHFSLGGFYDANLSTIMKDGGNHQNLLPKSRLNWDLDSEHSRMKGKEAESVMSNISQKGKWIKTGSEQENQDGIDGYNRQKVFPGLLNNAMAYDSYHSEPSSLSLSQFGGHGSLFPSHVDPHQNSGSGSVQFSSSNVAVPSGSQLLFSPSSATPSLFTPYAPFMANSSVDNDPRQFNHVQILSSSSNNSQVMQPHPLIQSFHSLSSPLRRLPLPFNSKLLDSDNNNNRSQPNKGSGSPS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0131 384 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 2 378 - -
Lan1g0131 384 MobiDBLite consensus disorder prediction 360 384 - -
Lan1g0131 384 MobiDBLite consensus disorder prediction 363 384 - -
Lan1g0131 384 MobiDBLite consensus disorder prediction 1 37 - -
Lan1g0131 384 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
Lan1g0131 384 MobiDBLite consensus disorder prediction 21 37 - -
Lan1g0131 384 Pfam TCP family transcription factor 55 182 IPR017887 -
Lan1g0131 384 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 378 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0131 Lan-Chr1 964756 967015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0131 4 351 TCP Transcription Factor Family AT5G60970 42.742 5.38e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan1g0131 TCP 5.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0131 - - lang:109361996 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1226 12 18287244 18289244 Lan1g0131 1 964756 967015 LSH
Lan1g1065 1 20820661 20822751 Lan1g0131 1 964756 967015 LSH