Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0109 ATGTCAGAGCAGGATTCATATTCTTTCCGTTTCCTATTACTCTTTTTCTTCATCCTTCTTTCAGGTGTTGTTGTTGTTGCTGGGGATTCTTTGGACACTGATAAACAGGTTCTGTTGATGCTGAAATCCTACCTAAACAACCAAACTGCTGCAGACCAAGGAAGGTATATAAATTGGAACAATAGTAGCACCAATCCTTGTGAATGGCCAGGAATTTCGTGCACCAACATGAGAGTTGTTGGCGTAGACCTCTCTTCCAATTACATCACGGGAAATATATTCGCGAATTTCTCTATGCTCACTGAGCTCACATACCTTGATCTCTCTTCCAATACCCTATCTGGTGAGATTCCTCAAGACTTGAGGCAGTGCCATAAGCTTTTGCATCTCAACTTGTCTCATAATATTCTCGCCGGAGAGCTAAATTTGACTGGCTTGACAAGTTTGCAGACATTGGACTTGTCTACCAATAGAATGGTTGGGGAGCTTGGGTTGAATTTCCCTTCCAATTGTGACAATTTAGTTACTTTGAATGTCTCAAGTAACAACTTAACTGGTAGGATTGATACTAATGTCTTTGATCAGTGTGTCAAGTTGAAGTACTTGGATTTGAGCACCAATAATCTCACTGGAGGGATATGGATGGAGTTTGCCAGGCTGAGATCATTTTCTGTCGCCGAGAATCATCTTAGTGGGACTATTCCTTCTGAAGCTTTTCCAGCAGGGAATTGTAACCTTGAAGACCTAGACCTTTCACAAAATGGTTTTGTTGGTGATGCACCAAAGGGTGTTGCTAACTGCAAGAGTTTAACCATTCTGAATCTTTCTAGTAACCATTTTAATGGGAGTATTCCCGTTGAAATCGGATACATTTCAGGTCTCAGTGCATTGTACTTGGGGAACAATAGCTTCTCAAGGGATATTCCAGACACCCTTTTGAACTTGACTAATTTGGTTTTCTTGGATTTGAGCAGAAATAGATTTGGTGAAGACATACAAGATATATTTGGGAAACTCAAGCAAGTGAACTTTCTTCTATTGCACACAAATTCTTACACTGGAGGATTAAATTCATCTGGAATTCTTAAATTACCAAACATAGTTCGGTTGGACCTAAGCTTCAATAACTTTTCAGGTCCATTGCCTGTTGAAATCTCTCAATTGTCAAGTCTGAAGTACTTAATGTTATCATATAACCACTTCAGCGGACCTATTCCACATGAATTTGGAAACATGTTGCGTCTGCAAGCGCTTGACATTGGCTCCAACAATTTGAGTGGGCGAATCCCACCAAGCCTCGGAAACTTGACTTCCCTCTTATGGTTAATGCTTGCAAATAACTCATTAACCGGAGAAATTCCCCCGGAGTTAGGAAACTGCTCAAGCTTGCTATGGTTAAACCTTGCCTATAACAAACTCTCTGGGAGATTTCCTTCTGAATTGTCAAAAATTGGAAGGAATGCCACACCCACATTTGAAGCAAATAGGAAAGGGGTTAGAATTATTGCTGGCTCGGGTGAATGTTTAGCAATGAGGAGATGGTTACCTGCAGATTACCCTCCATTCAGCTTTGTTTATAGCATCTTAACAAGGAAGAATTGTAGAAGCCTTTGGGACAAGTTGCTCAAAGGATATGGTCTTTTCCCATTTTGTACTCCTGGCTCCTCTTATAGCTTACCTCAGATTTCAGGGTATGTTCAACTCACTGGAAACCAGCTTAGTGGTGAAGTTCCTTCAGATATTGGGGCAATGGTGAACTTCAGCATGTTGCATTTGGGCTTCAACAATTTCTCAGGGGAATTCCCTCCAGTGATGGGAAGTATGCCACTTGTGGTTTTGAACATGACTAGAAACAAGCTTTCGGGTGAACTTCCCTTGGAAATTGGCAATTGGAAATGTATGATGAATCTGGATTTGTCTTGCAACAATTTCTCTGGGATGTTTCCCACAACTTTGAGCAAATTGCATGAGCTTAACAAGTTCAACATCTCATATAATCCCTTCATATCTGGTCCGGTCCCATCAACCGGACAATTCGCTACTTTTGGGAGAGATTCATATTTCGGAGACCCCCTCTTGATTCTTCCCAATTTTATTGATGCCAACATCACAAATGATAAAAACATTACCAATCACAACAATGACAAGAAAAGGCGTACAAAGTTGTCTGTGATTTTGGTGTTTCTAGCTATAGCACTGGCTTTCATGATATTTGGTATTCTTACCATTATAGTATGTGTAAAGGTGAAAAGACCCTCTTTGGAACCACTATATATCTTGAGGGACACAAAACAATGGAATGATTCAAGCAGCTCTGGATCCTCACCTTGGTTGTCTGATACAGTTAAGGTTATCCGTTTGGACAAGACAGCTTTTACTCATGATGACATCTTGAAAGCAACTTGCAGCTTCTCAGAGGACAGAATCATAGGAAAAGGAGGGTTTGGAACAGTTTACAAGGGAGTATTTCCTGATGGTAGAGTAGTGGCAGTGAAGAAGCTTCAAAGGGAAGGACTTGAGGGCGAAAAGGAATTCCGGGCTGAAATGGAGGTTCTATGTGGTCATGGCTTTGGTTGGCCTCATCCTAACCTGGTCACACTCTATGGTTGGTGCCTAAATGGTTCAGAGAAGATATTGGTTTATGAGTACATAGAAGGTGGAAGCTTGGAGGATCTAGTAACTGATAGAACGCGCTTTACTTGGAGGAGGAGACTAGAAGTGTCAATCAATGTTGCTAGAGCACTAGTCTATTTACACCATGAATGTTACCCTTCTATTGTGCATAGAGATGTGAAGGCTAGTAATGTGTTACTAGACAAGGATGGGAAGGCTAAGGTTACAGATTTTGGACTTGCAAGAGTGGTTGGTGCTGGGGATAGTCATGTGAGCACAATGGTGGCTGGCACAGTTGGTTATGTTGCACCCGAATATGGACAAACATGGCAAGCTACAACAAAAGGAGATGTGTATAGTTTTGGTGTGTTGGTTATGGAGCTTGCAACAGGAAGAAGAGCAGTGGATGGTGGTGAAGAGTGTTTGGTAGAATGGGGTAAGCGTGTCATGGGTTATGGAAGACATCATCATGGGTTCAGCAGCCATGCTATACCGGCTTTCGTCATGGGTATTGGGCTAGTTGGTGGGGCTGGGGAGATGGCTGAGCTGCTAAGGATCGGGGTGAAGTGCACAGCCGAGGCACCGCAGGCTAGGCCAAACATGAAGGAGGTTCTTGCTATGCTGGTTAGGATATCTGACCCCAAGGGAGACTCAAATCATGGACACTTTGGTTAG 3288 0.4231 MSEQDSYSFRFLLLFFFILLSGVVVVAGDSLDTDKQVLLMLKSYLNNQTAADQGRYINWNNSSTNPCEWPGISCTNMRVVGVDLSSNYITGNIFANFSMLTELTYLDLSSNTLSGEIPQDLRQCHKLLHLNLSHNILAGELNLTGLTSLQTLDLSTNRMVGELGLNFPSNCDNLVTLNVSSNNLTGRIDTNVFDQCVKLKYLDLSTNNLTGGIWMEFARLRSFSVAENHLSGTIPSEAFPAGNCNLEDLDLSQNGFVGDAPKGVANCKSLTILNLSSNHFNGSIPVEIGYISGLSALYLGNNSFSRDIPDTLLNLTNLVFLDLSRNRFGEDIQDIFGKLKQVNFLLLHTNSYTGGLNSSGILKLPNIVRLDLSFNNFSGPLPVEISQLSSLKYLMLSYNHFSGPIPHEFGNMLRLQALDIGSNNLSGRIPPSLGNLTSLLWLMLANNSLTGEIPPELGNCSSLLWLNLAYNKLSGRFPSELSKIGRNATPTFEANRKGVRIIAGSGECLAMRRWLPADYPPFSFVYSILTRKNCRSLWDKLLKGYGLFPFCTPGSSYSLPQISGYVQLTGNQLSGEVPSDIGAMVNFSMLHLGFNNFSGEFPPVMGSMPLVVLNMTRNKLSGELPLEIGNWKCMMNLDLSCNNFSGMFPTTLSKLHELNKFNISYNPFISGPVPSTGQFATFGRDSYFGDPLLILPNFIDANITNDKNITNHNNDKKRRTKLSVILVFLAIALAFMIFGILTIIVCVKVKRPSLEPLYILRDTKQWNDSSSSGSSPWLSDTVKVIRLDKTAFTHDDILKATCSFSEDRIIGKGGFGTVYKGVFPDGRVVAVKKLQREGLEGEKEFRAEMEVLCGHGFGWPHPNLVTLYGWCLNGSEKILVYEYIEGGSLEDLVTDRTRFTWRRRLEVSINVARALVYLHHECYPSIVHRDVKASNVLLDKDGKAKVTDFGLARVVGAGDSHVSTMVAGTVGYVAPEYGQTWQATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWGKRVMGYGRHHHGFSSHAIPAFVMGIGLVGGAGEMAELLRIGVKCTAEAPQARPNMKEVLAMLVRISDPKGDSNHGHFG* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0109 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Lan1g0109 1095 SUPERFAMILY L domain-like 566 674 - -
Lan1g0109 1095 Gene3D Ribonuclease Inhibitor 32 143 IPR032675 -
Lan1g0109 1095 SMART LRR_typ_2 100 124 IPR003591 -
Lan1g0109 1095 SMART LRR_typ_2 217 241 IPR003591 -
Lan1g0109 1095 SMART LRR_typ_2 146 170 IPR003591 -
Lan1g0109 1095 SMART LRR_typ_2 436 460 IPR003591 -
Lan1g0109 1095 SMART LRR_typ_2 388 411 IPR003591 -
Lan1g0109 1095 SMART LRR_typ_2 315 338 IPR003591 -
Lan1g0109 1095 SMART serkin_6 804 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0109 1095 Gene3D Ribonuclease Inhibitor 245 489 IPR032675 -
Lan1g0109 1095 SUPERFAMILY Protein kinase-like (PK-like) 788 1080 IPR011009 -
Lan1g0109 1095 SUPERFAMILY L domain-like 218 480 - -
Lan1g0109 1095 SUPERFAMILY RNI-like 72 286 - -
Lan1g0109 1095 Pfam Leucine Rich Repeat 414 436 IPR001611 GO:0005515
Lan1g0109 1095 Gene3D Ribonuclease Inhibitor 144 244 IPR032675 -
Lan1g0109 1095 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Lan1g0109 1095 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1086 - -
Lan1g0109 1095 Gene3D Transferase(Phosphotransferase) domain 1 884 1092 - -
Lan1g0109 1095 PRINTS Leucine-rich repeat signature 103 116 - -
Lan1g0109 1095 PRINTS Leucine-rich repeat signature 146 159 - -
Lan1g0109 1095 Gene3D Phosphorylase Kinase; domain 1 769 883 - -
Lan1g0109 1095 ProSiteProfiles Protein kinase domain profile. 804 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0109 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1086 - -
Lan1g0109 1095 Pfam Protein kinase domain 805 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0109 1095 ProSitePatterns Protein kinases ATP-binding region signature. 810 833 IPR017441 GO:0005524
Lan1g0109 1095 Pfam Leucine rich repeat 82 135 IPR001611 GO:0005515
Lan1g0109 1095 Pfam Leucine rich repeat 148 209 IPR001611 GO:0005515
Lan1g0109 1095 Gene3D Ribonuclease Inhibitor 551 709 IPR032675 -
Lan1g0109 1095 CDD STKc_IRAK 810 1082 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0109 Lan-Chr1 825698 829619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0109 11 1094 Receptor kinase-like Gene Family AT1G55610 31.780 9.45e-149 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lan1g0109 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0109 - - gmx:100816573 1674.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1238 12 18364732 18368451 Lan1g0109 1 825698 829619 LSH