Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0105 ATGGCGCTGTTCAGAAGGTTCTTCTACCGAAAACCCCCGGATCGGCTTCTTGAGATCTCTGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACGGATGTTTTGGAAGAAGATGAGTACAGAGTTTATATGGGAGGAATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAACTTTAAAGAAGGGGAAAGACGCAGCCAAATCTCAGACATCTTTTCTCAGTATGACATGACAGTTATGGAATATCCTCGGCAATATGAGGGTTGTCCACTTCTGCCTTTGGAGATGGTTCATCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCGGTGCTGGCATTTATGCTGGCAGGTCTTCTATTATACCGGAAACAGTACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCCCCCAGAGAACTTCTCCACCTTTTATCTTCCTTGAACCCACAACCTTCTCAGTTCAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCAGAGTGGCCCCCATCAGATACACCCTTGTATTTGGACTGTATGATTCTTAGAGACATTCCATTATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGCCCGGACCCATCAAAACCTGCTAATAGAAGTTCAGAGCTTCTTTTTTCAACTTCAAAATCCAAAAAGCATATTCGCCACTACTCACAGGCAGAGTGTATGCTCGTGAAAATTGATATCCATTGTCATGTTCAAGGAGATGTTGTTCTTGAGTGCATACATTTAAATAAAGATTTTACTCATGAGGAGATGATATTTAGAGTCATGTTCCATACTGCATTTGTGCGGTCAAATATATTGATGCTGAGCCGTGATGACATTGATATTTTGTGGGATGTAAAGGATCAATTTCCCAAGGATTTCAAAGCAGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGACTGAAAGCGCTGAGACTGAAAGCGCTTCACCTGAGGAATTCTATGAAGTGGAAGAGATTTTCAGCAACGTAATTGATGCACAGGAAGGAAAGGGGGAGTATGATTCTTTTGCTTTCCTTAACAATGCAGTGGATGATGAAAATAATAAAGAGGTCTGGAAGGATGAGGTGGATCCTCATTCTTTTCTCGATTATCCTCCTGATGAGGGGAGTAACAAGCAGGCTGGCAAACTGGATTCTGTTATTAATGAGGTGAAAGACATATCTGTTGATGATGTGAAGTACAGGACCAATGAGAGCATGGATCCAGATAATGATGCAGTGAAGGACATTGCTGTGGATGAAGGAGAAAACAAGTCAACTTCTACTGCACTGGCTTCTGATAAAATTCTTGAAGCAACGGAATTCACCTTGGATGTGCATGGGGAATTGACACTTCAGCAAAATAAATATGACGAAGATGACGAAGCAACAGAAAAGGAATTAGATTTCAAGGCTGGGCAGCAGATGCCTGATCTTTCCAGACCTGAATCTGGTAAACTACTTCCATTTGCTGTAAAGAAACAACTTCCATCCAACTCAAAGCCTTTGGGAGATACAGTTTCAACAAAACCAAAGATTAAACAAGAATCACCAGGGTTTCAGGTAAAACAAGCTAAGCCGAATGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTACACCAGTTCAATGCATGTCTATTATCCGCCTTCAAGGATTAATAGTGCACCAGCTGCTTTGTCAAAATTTACAGCTTCAAAGGAGAAATTGGAAGATTCCAAAGCAAGGTCTTTATCTGCTCCTCATGTCTCTGCAGCAGTTGTTTCTGTTGACATGACAAATGACCTGAAAAGTCGTAAGGTGGACACTTCAAAATCTTCAGGCCACATAGGAGCAGAAGTAGATGCAAACTGTCTACCATCATCAGTACTGTCAGTTAAAGAGACATGTCTTCAGTCAGCTGTTGAAACACAAGTGAGCTCAGAGCAACAATTTCCTCCACTGCCTCCACCTCCGCCGCCTCCTCCTCCTCCTCCATCTCATGCCAGAAACTCTTCTTTAGATGTTTTTGAACCCTTATCATTACAGGATGATGCATCACCTCAAGTCCCTCCACCGCCACCAGTTTCACCATCTTCCTCTTTAGGTGGAAACGTATCTACTGTACCTCCACCACCACCACCGCCACCAACTTTAACATCATTTACTGGACAAAACGTAGGGGTGAATTTACAAACTGCAACTTCTCTTCCTCCTCCCCCTCCATCTCCTTGGAAGTCTCTCTATTCATCAATCGCCATAGTTGAAGAGACTAGTGGTTCTCTCCCACTTCCCTCATACATCAGTGACAATTTATCCAAAGTTTCTGAAGTTGTTACCGTGGTAGCCCCTCCTCCACCGCCATCATCAACACCTCCAAAGCATGGAATTCCCCCTCCTCCTCCCCCTCCCCCTCTTCCTACATTTTCCACACATAGGGCTCCACCCCCTCCTCCACCACCCCCAATTGCATCACATAAAGCTCCATCAACACCCCTTCCTCTTGCTCCATCTCTCCCTCTACCTCCTTTTAGCAATGTTCCAAATGCTACTCCACCACCTCCACCTCCTTATAGTAGTGCTACTCCACCACCTCCACCACCGCCTCCACCTACTTATAGTAGTGCTACTCCACCTCCACCACCTCCCCCTCCTTTTAATAAAGCTCCCCTTCCACCGCCTCCACCTCCACCTCCTTATAATAGTGCTCCGCCGCCGCCACCTCCACCCCCTTTTAGTAGTGCTCCTCCGCCACCACCTCCACCTCCTTATAGTAGTGCTCCTCCGCCACCACCTTCACCTCCATTTGGTAGAGCTCCCCCTCCACCGCCTCCACCTCCATTTAGTACAGCCCCCCCTCCACCACCTCCACCTCCATTTGGTAGAGCCTCTCCTCCACCGCCTCCACCTCCATTTGGTAGAGCCCCTCCTCCACCGCCTCCACCTCCATTTGGTAGAGCCCCCCCTCCACCGCCTCATACTAGTGCTCCTCCACCACCGCCTCCACCTCCATTTGGTAGAGCTCCCCCGCCACCACCTCCACCTCCTTATAGCAATGCTCCACCCCCTCCACCTCCACCTCCATTTGGTAGAGCTCCACCATCCCCACCACCACCTCCTCCATCAAGTCGAGCCCCACCTCCACCTCCACCTCCTCCAATGTCTGGAGCTCCACCTCCCCCACCTCCACCAGCTCGTGGAGCCCCACCTCCTCCGCCCCCTCCTGGTGGTCGAGGACCACCTCCTCCGCCCCCTCCTGGTGGTAGAGGCCCACCTCCCCCGCCCCCTCCTGGTGGTAGAGGCCCACCTCCCCCACCTCCTCCTGGTGCTCCCGGTGCTCCTCCTCCTCCTAGACTTCCTGGTGGTGCACCTCCACCACCTCCACCAAAAGGTGCAAATGTTGGAGCTGATCCAAGAGGGAGAGGGCGTGGTGGATATGCACGCCCAGGAGGACCTGGTGCGATGACAGCACCCAAGCGATCCTCTTTAAAGCCTCTACATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACACGGAGAACCTCAAATTGCACCAGAGTTTGATGTATCAGAGTTAGAGAAGCTTTTCTCTGCTAATGTTCCAAAGCCTGCTGAATCTAAAACTGCACGGCGTAAATCTGCTGGATCTAAACCCGAGAAAGTCCATTTGGTTGACCTGAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCGGTACTGGCTATGGACGAGTCAGTATTAGATGTTGATCAGGTGGATAATCTCATTAAGTTTTGTCCCACCAAAGAGGAGATGGAACTTTTGAAGGGATACACAGGCGATAAGGAGAACTTGGGGAGGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCACGGGTGGAATCAAAATTAAGAATATTCTCTTTCAAGATTCAGTTTGGGTCTCAGGTTACAGAATTCAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAATTCTGTCAAACTTAAGGAGATCATGAAGAAAATTCTTTTTTTGGGTAATACATTGAATCAAGGAACCGCACGGGGGTCTGCAGTTGGGTTCAAGTTGGATAGTCTCTCAAAGCTCACCGACACCCGTGCTACTAACAATAAGATGACACTGATGCATTATCTTTGCAAGGTCCTTGCTGAAAAGTCGCCTGGACTCCTTGATTTTCACCTAGACCTTGTTAGCCTGGAACCTTCGACCAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCAGCAAGGGACTAGAAAAGGTTAAACAAGAGCTTGCTGCATCTGTAAATGATGGACCTGTGTCTGACATTTTCCGTAAGACATTGAAAGGTTTCATAGATGTAGCCGAGTCTGAGGTGGCATCTCTGACAAGTCTATATTCCGTGGTGGGTAGAAATGCAGATGCACTTGCACTATACTTCGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGTTACTGTAACTCTCTTGAATTTTGTGAGGTTGTTTCGGAAAGCACATGAAGAGAATTTTAAACAAGCAGAGTTAGAGAGGAAGAAAGCTGAAAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAACTTGACAAAGAAGAGTGCAAAAAATAGTTGA 4833 0.4687 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFKEGERRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMVHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLSSLNPQPSQFRYLQYISRRHLGSEWPPSDTPLYLDCMILRDIPLFDDGKGCRPVVRVYGPDPSKPANRSSELLFSTSKSKKHIRHYSQAECMLVKIDIHCHVQGDVVLECIHLNKDFTHEEMIFRVMFHTAFVRSNILMLSRDDIDILWDVKDQFPKDFKAEVLFLDADAVIPDLTTVTVSEDANETESAETESASPEEFYEVEEIFSNVIDAQEGKGEYDSFAFLNNAVDDENNKEVWKDEVDPHSFLDYPPDEGSNKQAGKLDSVINEVKDISVDDVKYRTNESMDPDNDAVKDIAVDEGENKSTSTALASDKILEATEFTLDVHGELTLQQNKYDEDDEATEKELDFKAGQQMPDLSRPESGKLLPFAVKKQLPSNSKPLGDTVSTKPKIKQESPGFQVKQAKPNAVTRWIPSNKGSYTSSMHVYYPPSRINSAPAALSKFTASKEKLEDSKARSLSAPHVSAAVVSVDMTNDLKSRKVDTSKSSGHIGAEVDANCLPSSVLSVKETCLQSAVETQVSSEQQFPPLPPPPPPPPPPPSHARNSSLDVFEPLSLQDDASPQVPPPPPVSPSSSLGGNVSTVPPPPPPPPTLTSFTGQNVGVNLQTATSLPPPPPSPWKSLYSSIAIVEETSGSLPLPSYISDNLSKVSEVVTVVAPPPPPSSTPPKHGIPPPPPPPPLPTFSTHRAPPPPPPPPIASHKAPSTPLPLAPSLPLPPFSNVPNATPPPPPPYSSATPPPPPPPPPTYSSATPPPPPPPPFNKAPLPPPPPPPPYNSAPPPPPPPPFSSAPPPPPPPPYSSAPPPPPSPPFGRAPPPPPPPPFSTAPPPPPPPPFGRASPPPPPPPFGRAPPPPPPPPFGRAPPPPPHTSAPPPPPPPPFGRAPPPPPPPPYSNAPPPPPPPPFGRAPPSPPPPPPSSRAPPPPPPPPMSGAPPPPPPPARGAPPPPPPPGGRGPPPPPPPGGRGPPPPPPPGGRGPPPPPPPGAPGAPPPPRLPGGAPPPPPPKGANVGADPRGRGRGGYARPGGPGAMTAPKRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSANVPKPAESKTARRKSAGSKPEKVHLVDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVDNLIKFCPTKEEMELLKGYTGDKENLGRCEQFFLELMKVPRVESKLRIFSFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILFLGNTLNQGTARGSAVGFKLDSLSKLTDTRATNNKMTLMHYLCKVLAEKSPGLLDFHLDLVSLEPSTKIQLKSLAEEMQAISKGLEKVKQELAASVNDGPVSDIFRKTLKGFIDVAESEVASLTSLYSVVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENFKQAELERKKAEKEAEMEKAKGVNLTKKSAKNS* 1611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0105 1610 Coils Coil 1477 1497 - -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 826 1178 - -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 646 665 - -
Lan1g0105 1610 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1271 1598 - -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 686 789 - -
Lan1g0105 1610 Gene3D - 205 336 - -
Lan1g0105 1610 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 504 523 - -
Lan1g0105 1610 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 826 1212 - -
Lan1g0105 1610 PANTHER FORMIN-J 1 789 - -
Lan1g0105 1610 PANTHER FORMIN-J 960 1604 - -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 504 578 - -
Lan1g0105 1610 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 1582 1602 - -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 1251 1273 - -
Lan1g0105 1610 SMART it6_source 620 1610 IPR015425 -
Lan1g0105 1610 SMART PTEN_C2_2 198 338 IPR014020 -
Lan1g0105 1610 Gene3D Formin, FH2 domain 1199 1582 IPR042201 -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 1582 1610 - -
Lan1g0105 1610 Pfam Formin Homology 2 Domain 1202 1570 IPR015425 -
Lan1g0105 1610 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1198 1596 IPR015425 -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 1258 1273 - -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 696 714 - -
Lan1g0105 1610 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lan1g0105 1610 Coils Coil 1571 1600 - -
Lan1g0105 1610 MobiDBLite consensus disorder prediction 550 566 - -
Lan1g0105 1610 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0105 Lan-Chr1 786055 798435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0105 1 613 FH2 protein (formin) Gene Family AT5G07740 64.935 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0105 - - lang:109353635 1168.68