Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0103 ATGTCCTACAACAACAACATGGGAATAGAGAAGCACCCTTTTGTTTCATCTCTTTCCCTTCTTTTCATCTTTGCATATTCTGCTTGTGCCATTGACTCTTCTTTCTCACCAACTGTTAATTATCTCATTGATTGTGGCTCCATAAATAAAACTAAACTCAAAGATGGTAGAACATTCAAATCTGATCGTGAAACCACTTCTCTATTGGATACAACAGAAGATATTCAAGCTTCAGTTAACTACATTAACATTACTAATAAAGTTTCTTCTTCTTCTTTGCCTTTGTATCATACTGCTAGACTTTTCACTGAGGAATCAACATACATATTCTACATTTCCAAAACCGGTCGGCTTTGGATTCGCCTTTACTTCCTTCCACTCCCTCACCCCTCTTATAATCTAACAAGTGCTGTTTTTTCTGTCCACACTGATCACTTTGTGCTCTTGCATGAGTTTTCTGTTACAAAAAATGATACTTTAGTTTTCAAGGAATACCTTGTTAATGTTTCTGACTCTAGATTCTCTCTTAAATTCAAGCCCATGAAGAATTCACTAGCATTCATCAATGCTATTGAGGTTGTCTCTGCCCCTGACACACTTATATCTGATTCAGCTACTGCAGTTGCACGACTTGGTGAATTCAAAGGGTTGTTTCAATCTGCTCTTCAAGTGTCTTATAGAGTAAATATTGGTGGCCCTGCTATAACACCTGATAGTGATACCTTGTCAAGAACATGGGTATCTGGTGCCTCATATAATACCTTCCCACAAGGCTCTGAGAATGTTGTCGTGTCGAACAAAAGCATCAAATATCCACAAACTGGAGCTACACCTTTGATTGCCCCTAACTTTGTTTATGCAACTGCTGCAGAGATGAAGGATCCTAAAATTATGCAATCCAATTTCAATCTCAGTTGGATGATGAAGGTGGAAAAGAGCTACTCCTATTTGATAAGATTGCATTTTTGTGACATTGTGAGCAAGGCCCTTAATGAATTGTACTTCAATGTGTACATCAATGGGATGGTTGGTGTGTCATCTTTAGACCTATCATCTCAAACCAAAGCTTTATCAACTGCGTATTACCAAGACTTCGTGCTTAGTGAATCTGCTATCGCAAATGGTTCCATCTTGGTTCAGGTAGGACCAGCTAATCTCCAACAAGGCACAGCCAATGCAATTCTGAATGGAATTGAAGTGATGAAGATGAGTAACTGTGCAGGTAGCTTTGATGGTCTTGTATCTGTGGATGGGAAATATAAAGGACCAACAAACAAGGCTATAAAAATTGCTGCTGTTTGTGGTTTAGGATTGGCTGTGATGGGAATGTTGTTGCTAGCAGTGACTATTATTCGGTGGCATAAGAGACCTCAAGGCTGGGAAAAGCGTAAGACGATCTCATCATGGATCATCCCGATCAATTCAACCTGTAAAACTAGCTTATTCTCGATGAAAAGCAGTTGTAGAAGCTCAAGCACATTCAGTTCTCACAAGAGTAGGAATGGTCACTCTCCACGAGGCCCTGCGCGCTTCTTCCCTTTCGGTGAATTGCAACAAGCCACACATAACTTTGATGAAAGGGGAGTTATTGGTGTTGGAGGCTTTGGGAAAGTGTATCTTGGAACCTTGGAAGATGGAAAAAAGGTTGCTATAAAAAGAGGTAATGGTAGTACTGAACAAGGCATCAATGAGTTCAGAACTGAGTTAAACATGCTCTCCCAGCTTCGCCATCGCCACCTAGTCTCACTCATAGGTTTCTGTGATGAGAATTCAGAGATGATTATTGTGTATGAATATATGGCTAATGGACCATTTCGTTCCCACATTTATGGCTCCAATCTCCCTCCATTGTCATGGAAACAAAGGCTTGAGATATGCATTGGTGCTGCTCGTGGCCTGCACTATCTACACACTGGTGCAGCTCAAAGTATCACACACCGTGATGTGAAGACAACAAACATTCTCTTGGATGAGAACTATGTTGCTAAGGTTTCTGACTTCGGCTTATCAAAAGTTGTTCCTGAAAAAGCCCAAGTTAGCACGGCTGTGAAGGGTAGTTTCGGATACCTGGACCCAGAGTACTTCAGGAGCCAACAACTAACCCAAAAATCTGATGTATACTCTTTCGGCGTAGTCCTTATTGAGGTCCTTTGTGCAAGACCAGTTATTTTCCCAACACTTCCAAGGGAACAAGTCAACTTGGCTGATTGGGCAATACAGCAGCATAGAAGAGGCATGCTTCATAAGTTAATCGATCCGCGCATTGTTGACACTATTAGCGCCGAGTCTCTAAAGAAGTACGTCGAAGCTGCAGACAAGTGTCTAGCAGATCATGGTGTTGATAGGCCTAACATGGGTGATGTGTTATGGCACTTAGAATATGCTTTGCAACTACATGAAGCTGCCTCACAGATTAATGAACCGGAAGATCAAAGTGTGAATTTAATTGCTTTTCAGCATACAAAAGAAAATGATAGTATAGAAGCAGATCATTCAGGTGCTCAAGCAAGTGATGTGTCTGATACCACAGATGTTGATTCTGCTTTTTCTCAAGTAGTCAACATGCATGGAAGGTAG 2577 0.4094 MSYNNNMGIEKHPFVSSLSLLFIFAYSACAIDSSFSPTVNYLIDCGSINKTKLKDGRTFKSDRETTSLLDTTEDIQASVNYINITNKVSSSSLPLYHTARLFTEESTYIFYISKTGRLWIRLYFLPLPHPSYNLTSAVFSVHTDHFVLLHEFSVTKNDTLVFKEYLVNVSDSRFSLKFKPMKNSLAFINAIEVVSAPDTLISDSATAVARLGEFKGLFQSALQVSYRVNIGGPAITPDSDTLSRTWVSGASYNTFPQGSENVVVSNKSIKYPQTGATPLIAPNFVYATAAEMKDPKIMQSNFNLSWMMKVEKSYSYLIRLHFCDIVSKALNELYFNVYINGMVGVSSLDLSSQTKALSTAYYQDFVLSESAIANGSILVQVGPANLQQGTANAILNGIEVMKMSNCAGSFDGLVSVDGKYKGPTNKAIKIAAVCGLGLAVMGMLLLAVTIIRWHKRPQGWEKRKTISSWIIPINSTCKTSLFSMKSSCRSSSTFSSHKSRNGHSPRGPARFFPFGELQQATHNFDERGVIGVGGFGKVYLGTLEDGKKVAIKRGNGSTEQGINEFRTELNMLSQLRHRHLVSLIGFCDENSEMIIVYEYMANGPFRSHIYGSNLPPLSWKQRLEICIGAARGLHYLHTGAAQSITHRDVKTTNILLDENYVAKVSDFGLSKVVPEKAQVSTAVKGSFGYLDPEYFRSQQLTQKSDVYSFGVVLIEVLCARPVIFPTLPREQVNLADWAIQQHRRGMLHKLIDPRIVDTISAESLKKYVEAADKCLADHGVDRPNMGDVLWHLEYALQLHEAASQINEPEDQSVNLIAFQHTKENDSIEADHSGAQASDVSDTTDVDSAFSQVVNMHGR* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0103 858 Pfam Protein tyrosine and serine/threonine kinase 529 731 IPR001245 GO:0004672|GO:0006468
Lan1g0103 858 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 22 850 - -
Lan1g0103 858 Pfam Malectin-like domain 43 403 IPR024788 -
Lan1g0103 858 SMART serkin_6 524 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0103 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Lan1g0103 858 PANTHER OS07G0166700 PROTEIN 22 850 IPR045272 GO:0004714|GO:0006468
Lan1g0103 858 ProSiteProfiles Protein kinase domain profile. 524 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0103 858 Gene3D Phosphorylase Kinase; domain 1 484 599 - -
Lan1g0103 858 Gene3D Transferase(Phosphotransferase) domain 1 600 820 - -
Lan1g0103 858 CDD STKc_IRAK 530 793 - -
Lan1g0103 858 Gene3D - 221 405 - -
Lan1g0103 858 Gene3D - 36 197 - -
Lan1g0103 858 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Lan1g0103 858 SUPERFAMILY Protein kinase-like (PK-like) 507 794 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0103 Lan-Chr1 779327 782185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0103 33 812 Receptor kinase-like Gene Family AT5G61350 62.328 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan1g0103 Malectin_like 6.4e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0103 - - gmx:100814982 1172.92