Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0083 ATGGGAAATTGTTTTAGAACTCGTCGTTCTAAGGTTGATAACACTCGCATTTACCAACCTACTTCCGATTCTACAAAAGTTCCATGTAGATGCTCCCAACTGTTAGCTCATTCAGGTCCATCAGTGCATCGATATAGCGGTGGAGGTAAACCTGAGGTTCTCCCTACTCCAAGATCCGAAGGCGACATACTTTCATCCCCGCATTTAAAAGCCTTCAGATTCAATGAACTTAAGAATGCTACTAGAAATTTCCTTTCCGATAGTGTAATTGGACAAGGGGGATTTGGTAATGTCTATAAGGGATGGATTGATGGTCTAACCCTTGGGGCTGCAAGGCCTGGTGGATCTGAAATGGTTGTAGCTGTGAAAAAGCTTAAAGCTGAAGGTTTTCAAGGGCATAAAGAGTGGCTTTCTGAACTCAATTATCTTGGACAACTTCATCATCCAAATCTTGTCAAACTTATTGGATACTGTCTGGAAGGGGATAACCGGCTTCTCGTGTATGAGTACATGCCCAATGGAAGCTTGGAAAATCATCTATTTCGCAAGGGTGCAGAACCACTTCCTTGGGCAACAAGAATCAAAGTTGCTATTGGTGCTGCTCGAGGTCTCACCTTCCTGCATGACTCTAAGCAACAAGTTATATACCGTGATTTCAAGGCTTCCAATATTTTATTAGATTCGGAATTTAATGCAAAACTTTCAGACTTTGGTTTCGCCAAAGCAGGCCCAACTGGTGAAAATAGTCATGTTTCCACTCAAGTACTGGGTACTCATGGCTATGCTGCTCCTGAATATATTGCTACAGGCTGGCTGACTGCAAAATGTGATGTGTATAGCTTTGGAGTTGTGCTATTGGAAATGTTATCAGGACGGAACGCTGTCGATAAAACAAAATCTGGAGTGGAACATAATCTGGTAGATTGGGCAAGACCTTATTTGAATGATCGGAGGAAATTGTTCAGGATCATGGACACAAAGTTAGAAGGACAGTATCCACAGAGGGGAGCTTATGCAGTTGCAATTCTTGCATTCCAGTGTATTAGTGAGGCCAAGATTAGGCCACAAATGTCTGAGGTTTTAGCTATCTTGGAACAATTGCCAGTCACCAGACATTCATCCCGGTCCAGCCCGGCCAGAGCCGAAGAGATACCCAACTCGATTTCAACGAGAGAGGGCCTATAG 1185 0.4338 MGNCFRTRRSKVDNTRIYQPTSDSTKVPCRCSQLLAHSGPSVHRYSGGGKPEVLPTPRSEGDILSSPHLKAFRFNELKNATRNFLSDSVIGQGGFGNVYKGWIDGLTLGAARPGGSEMVVAVKKLKAEGFQGHKEWLSELNYLGQLHHPNLVKLIGYCLEGDNRLLVYEYMPNGSLENHLFRKGAEPLPWATRIKVAIGAARGLTFLHDSKQQVIYRDFKASNILLDSEFNAKLSDFGFAKAGPTGENSHVSTQVLGTHGYAAPEYIATGWLTAKCDVYSFGVVLLEMLSGRNAVDKTKSGVEHNLVDWARPYLNDRRKLFRIMDTKLEGQYPQRGAYAVAILAFQCISEAKIRPQMSEVLAILEQLPVTRHSSRSSPARAEEIPNSISTREGL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0083 394 PANTHER BNAC02G17010D PROTEIN 21 383 - -
Lan1g0083 394 PANTHER OS01G0588500 PROTEIN-RELATED 21 383 - -
Lan1g0083 394 ProSiteProfiles Protein kinase domain profile. 84 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0083 394 SUPERFAMILY Protein kinase-like (PK-like) 62 365 IPR011009 -
Lan1g0083 394 ProSitePatterns Protein kinases ATP-binding region signature. 90 123 IPR017441 GO:0005524
Lan1g0083 394 MobiDBLite consensus disorder prediction 374 394 - -
Lan1g0083 394 Gene3D Transferase(Phosphotransferase) domain 1 171 386 - -
Lan1g0083 394 CDD STKc_IRAK 90 367 - -
Lan1g0083 394 Pfam Protein tyrosine and serine/threonine kinase 88 298 IPR001245 GO:0004672|GO:0006468
Lan1g0083 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Lan1g0083 394 Gene3D Phosphorylase Kinase; domain 1 56 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0083 Lan-Chr1 653771 657141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0083 70 378 Glycoside Hydrolase AT3G07070 50.799 3.89e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan1g0083 PK_Tyr_Ser-Thr 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0083 - - pvu:PHAVU_003G191400g 567.385