Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0082 ATGGCAAATCCTGCTCCTGCCAGTTTCTGGACTCAGGCAAACGCTCTTTTCAGGAAGAACATAACCTATCAGAAACGGAACGTGAAGACAAATATTCTGTTGATCCTGTTCCCAGTGTTACTGTGTGTGTTACTGGTTGTGTTGCAACGTGCCCTAGACCGTGTTCAGAGTAAGGATAATGATGGAAATAATTGTGTGAATAAGAGTAATAATGAAGGTGGTGCGAATTGGTATACTACAGGGGATGTGAGTAAAGTTCCAGTGTGTGCAGTTCCTAATCCACCACAGTGGCCTCCTTTCTTTCAACTTCCTAATCTACAATTCTCAGCTTTTCAAACCAATATTCTTCCATTTTCTGATTTGCAACAAAATAAGTGCAGGGCTCATGATAAATGTGCTTTAATTATGCTCTTCACTGCCTCTAATTTCTCTTTTGCACAATCTGTATATGGAAACATGTTCACAAGCCCCTTCCATATAGATCCCACTGATACAATGGGTAGTTTGGCAACAAATGTCCTGGGAACTGAAACAGTGCAAGTCGAAAACATTTATTTGGAACCTGCTTTCGCTGTGGATGTTCCTATTTATTATCTACAAAATAAATGCAAACTTAACTCAACTTTCTCCATTACCTTCGAGGAAGGTGGCGTCACCTTTGATGACAAAGAGGTCAGATGTATCCAGTGTTTACGTTTATGGCGTAATAGTTCTTCTGATATAAACTCTGAACTATATCAAGGTTATTATAATGGTAACACAAAAGGACAGATCAATGAGATAGCTGCAGCTTTTGATCTTCTAAACTCAAATGAGAATGGATTTAATGTCATCATATGGCACACCTCAACCAAGAGGAGTGATGCTCGTTCTATAAATCTTATATCAAATGCCTACCTTCAGTCTGTGGTGGGACCTAGTGCCAAAATGTTATTTGATTTTGTAAAGGAAATGCCAAAGCATTGGATCACATCTAAGATTGATATAGGTTCTCTACTGGGAAGTCTGCTCTATATATGGGTCATCATGCAACTTTTTCCTGTTATTCTAGCATCACTGGTATATGAGAAGGAACAAAAATTAAGACTCATGATGCAAATGCATGGTCTTAGTCATGGGCCGTATTGGGTGATCTCATATGGTTATTTTCTTACTATATCAGTGATTTACATGCTGTGTTTTGTGGTATTTGGCTCATTGTTGGGATTAAGCTTCTTCAGATTGAATGACTACAGCGTCCAATTTGTGTTTTATTTCATTTATATAAACTTACAAATCTCAGTAGCATTTCTGGTGTCTTCCATGTTCTCTAAAGTTAAGACTGCCACAGTAAGTGCATTTATAGTTGTATTTTCAACCGGATTATTAGCAGGCTTTCTTTCTGAATCTTCAGTTTCAAGCTCATCACTTCCAACATGGTGGACCATTGTTATGGAGTTGTATCCTGGTTTTGCGTTATCTCGTGGGTTATATGAGTTTGCAGACTCTGCTTCGAATGGTGATGGTGTACAGTGGGAGAATATGACTGATAGCACCAGTGGCATGATACAGGTCTTAATTATCATGTCTGTTGAGTGGATAGTAGTGCTTTATGTTGCTTATTACATCGATCAAGGAAGAAGTCCTCTTTCTTTCTTCAAAAGATCCCGGAAACAGCACTCTTCATCTACACAAAAGCTTAGTATCGGACAGCAGCTGGGGTATAATGCCATGGTTCACTTACAAAAACCTGATATCATGCAAGAGAGGGAGAAGGTGGAGCAGCTGTTACTCCAACCAACTAGTAATCATGCAATTGTTTGTGACGAGCTAAAAAAAGTGTATCCAGGGCAGGATGGAAACCCAGAAAAAGTTGCAGTTAGAGGATTATCCCTTGCTTTGCCTCAAGGGGAATGCTTCGGTATGCTTGGTCCCAATGGTGCTGGAAAGACTTCATTTATCAATATGATGATTGGTCTTACAAAGCCAACAGCTGGCACTGCATATGTTCAAGGCCTGGACATAAGAAATCAAATAAATGAAATATATACTACAACAGGTGTATGCCCACAGCATGACTTGTTATGGGAAAGCTTGACCGGAAGAGAGCACCTACTTTTTTATGGCAGACTTAAGAATCTTAAAGGTTCAGCCTTAACCCAAGCAGTTGAAGAATCTTTGAAGAATTTAAACATTTTTCATGGAGGAGTTGCTGATAAACGAGCAGGAACTTACAGTGGAGGCATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGTGACCCTAAAGTTGTTTACATGGATGAGCCAAGTACCGGGTTAGACCCTGCATCAAGAAACAGCTTATGGAATGTTATTAAGGTTGCCAAACAGGACCGTGCAATTATTCTCACCACACATTCCATGGAAGAGGCAGAAGCCTTATGCGATCGATTAGGAATATTTGTAAATGGTAGCTTGCAGTGCATAGGAAATCCAACTGAGCTGAAAAGTAGATATGGAGGAAGTTATGTGTTCACAATAACAACACATTTATATCATGAGAAGAATGTGGAGAACATGGTGTTGCAGTTTTCACCAAATGCCAAAAAGATATACCATATATCTGGTACCCAAAAGTTTGAGCTTCCTAAAGGGGAAGTTAGAATATCAGATGTATTCAGAGCTGTTGAGAATGCAAAGAGACACTTCACAGTTTCTGCATGGGGTTTAGCTGACACAACAATGGAAGATGTTTTCATTAAGGTTGCACGTGGAGCTCAGGAATCTATAGACTTATCATAA 2766 0.3944 MANPAPASFWTQANALFRKNITYQKRNVKTNILLILFPVLLCVLLVVLQRALDRVQSKDNDGNNCVNKSNNEGGANWYTTGDVSKVPVCAVPNPPQWPPFFQLPNLQFSAFQTNILPFSDLQQNKCRAHDKCALIMLFTASNFSFAQSVYGNMFTSPFHIDPTDTMGSLATNVLGTETVQVENIYLEPAFAVDVPIYYLQNKCKLNSTFSITFEEGGVTFDDKEVRCIQCLRLWRNSSSDINSELYQGYYNGNTKGQINEIAAAFDLLNSNENGFNVIIWHTSTKRSDARSINLISNAYLQSVVGPSAKMLFDFVKEMPKHWITSKIDIGSLLGSLLYIWVIMQLFPVILASLVYEKEQKLRLMMQMHGLSHGPYWVISYGYFLTISVIYMLCFVVFGSLLGLSFFRLNDYSVQFVFYFIYINLQISVAFLVSSMFSKVKTATVSAFIVVFSTGLLAGFLSESSVSSSSLPTWWTIVMELYPGFALSRGLYEFADSASNGDGVQWENMTDSTSGMIQVLIIMSVEWIVVLYVAYYIDQGRSPLSFFKRSRKQHSSSTQKLSIGQQLGYNAMVHLQKPDIMQEREKVEQLLLQPTSNHAIVCDELKKVYPGQDGNPEKVAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTAGTAYVQGLDIRNQINEIYTTTGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTQAVEESLKNLNIFHGGVADKRAGTYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNSLWNVIKVAKQDRAIILTTHSMEEAEALCDRLGIFVNGSLQCIGNPTELKSRYGGSYVFTITTHLYHEKNVENMVLQFSPNAKKIYHISGTQKFELPKGEVRISDVFRAVENAKRHFTVSAWGLADTTMEDVFIKVARGAQESIDLS* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0082 921 Pfam ABC transporter 621 765 IPR003439 GO:0005524
Lan1g0082 921 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 599 836 IPR003439 GO:0005524
Lan1g0082 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 598 827 IPR027417 -
Lan1g0082 921 SMART AAA_5 629 813 IPR003593 -
Lan1g0082 921 ProSitePatterns ABC transporters family signature. 738 752 IPR017871 GO:0005524
Lan1g0082 921 Pfam ABC-2 family transporter protein 329 534 - -
Lan1g0082 921 CDD ABC_subfamily_A 603 824 - -
Lan1g0082 921 Gene3D - 588 859 IPR027417 -
Lan1g0082 921 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 6 917 - -
Lan1g0082 921 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 917 IPR026082 GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0082 Lan-Chr1 646646 653689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0082 603 826 Calmodulin-binding Proteins AT2G36910 22.222 5.20e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0082 - - gmx:100805474 1178.31