Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0080 ATGGAGTTTGCTTCAGGAAGATCTGGTTCTGGAGGTGGTGGTGAAGTCAAAGAAGAGAAGAGAAGTGATTATAGTGTTAATGATGATGAACTTCGTCATAATAAACAAGAGAGTATTGTTCAGGAACCACCTATGACTAATGCTGAAAGATCCATGCAGGAGGCTAAACCTAAGGAATGCTCAGTCAAAAAGAACAAGGTTGATTATCAGCTTGAAACAGCTAAAGCTGAAATGGGTGAAGTGAAAGAAGAAAATGAACGGTTAAAGATGAGTTTGAACAAAATAATGGAAGAGTACCGGACATTGCAAATGCAATTTCATGAAAGAAAAATGTCTACTGATAAAGAAAATAATCTTAGCCATGAAGAAATAATAGAGGAATCGGATATGGTTTCACTTAGCCTAGGTAGGGTTCCAAGAAATCATGAAGAGAAAGTTATAAAAGTTACTAAACCAATATTGAAGGATGAAGAAGAATTTAACCAAGACTTGGCTCTTGGATTGGAGTGCAAATATGAAACATCAAAATCAGGAAGCACTACTAATGTAGCTAATTTTCCAAATACTACAAGCCCAACCAATAGTTCTGAAGTACAAAAGGAAGAAGCTGGTAAAATATTGAAGACAGTGAGAGATGTTGAACATGATGAAGTTTCACAACAAACTCCTGCAAAGAAAGCTAGAGTTTGTGTGAGAGCAAGATGTGAAACTCCAACTATGAATGATGGATGCCAATGGAGGAAATATGGACAAAAGATTTCAAAGGGAAATCCTTGCCCTCGAGCTTATTATCGTTGCACCATTTCACCATCATGCCCAGTAAGAAAACAGGTGCAAAGATGTGTTGAGGACATGTCCATTTTAATCACCACCTATGAAGGAACACACAACCACTCTCTTCCTCTTTCAGCTACTGCCATGGCTTCCACAACTTCTGCAGCAGCTTCAATGCTATTGTCTGGTTCATCAACCTCTCACTCTAGCTCAATCCCTTTTACCTCAACAACCTCAACCATGAACAATCATGCTAATAGTAATAATCTTCATGGCCTCAAATTTTATCTCTCAGATGGTTCCAAACCAAAGCAATTATACCTCTCTAGTCCTGCACTCACATCTTCACCTTCACATCCAACCATCACACTAGACCTTACTTCAAACCCATCTTTATCCTCATCTCCCTTTGTTAGATTCAATACTTCAAACTATAATCAACCAAGATATCCATCTTCCACTACAAGTCTCAACTTCAGTTCCACTGAATCCAACAACAATAATAATGCAATAATGTCTTGGAGTAATAACGGGTTCCTCAACTATGGTAGTACTCAACCTTATAATAGCAACAAGAACAACAACAACATCCTTAGCACTGTAAACTTTGCAAGACAACAACAACAACAACAACCAATAGAAAACTTTTACCAACCCTTCATGCAAAACAGCAACACGTTCCTTCCTCAAGGAGTTATTACTAGTACTATTCATAATCAACATGGTCTACCAGATACTATAGCTGCAGCAACAAAAGCAATCACAGCAGACCCTACTTTTCAGACAGCATTGGCAGCAGCACTTAGTTCATTTATTGGAAGTAGTGGTGCTAATGGAAGCACACAAGGGAATATTAATGAAGGTATTGGAGAAAAGTTGAGTCAAAAAATAAAATGGGCAGAGATGTTTCCAGCATCTTCTACTAGTTTGGCTAATTCAGCTTCAAAGACCAATGGTGGTTGTGCATCAAACTTCTTGAACAAAACTTCCACGAATACATAG 1776 0.3806 MEFASGRSGSGGGGEVKEEKRSDYSVNDDELRHNKQESIVQEPPMTNAERSMQEAKPKECSVKKNKVDYQLETAKAEMGEVKEENERLKMSLNKIMEEYRTLQMQFHERKMSTDKENNLSHEEIIEESDMVSLSLGRVPRNHEEKVIKVTKPILKDEEEFNQDLALGLECKYETSKSGSTTNVANFPNTTSPTNSSEVQKEEAGKILKTVRDVEHDEVSQQTPAKKARVCVRARCETPTMNDGCQWRKYGQKISKGNPCPRAYYRCTISPSCPVRKQVQRCVEDMSILITTYEGTHNHSLPLSATAMASTTSAAASMLLSGSSTSHSSSIPFTSTTSTMNNHANSNNLHGLKFYLSDGSKPKQLYLSSPALTSSPSHPTITLDLTSNPSLSSSPFVRFNTSNYNQPRYPSSTTSLNFSSTESNNNNNAIMSWSNNGFLNYGSTQPYNSNKNNNNILSTVNFARQQQQQQPIENFYQPFMQNSNTFLPQGVITSTIHNQHGLPDTIAAATKAITADPTFQTALAAALSSFIGSSGANGSTQGNINEGIGEKLSQKIKWAEMFPASSTSLANSASKTNGGCASNFLNKTSTNT* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0080 591 Pfam WRKY DNA -binding domain 241 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0080 591 MobiDBLite consensus disorder prediction 13 37 - -
Lan1g0080 591 ProSiteProfiles WRKY domain profile. 235 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0080 591 Coils Coil 71 105 - -
Lan1g0080 591 MobiDBLite consensus disorder prediction 177 200 - -
Lan1g0080 591 SUPERFAMILY WRKY DNA-binding domain 233 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g0080 591 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 41 590 IPR044810 GO:0003700
Lan1g0080 591 Gene3D WRKY domain 224 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g0080 591 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 41 590 - -
Lan1g0080 591 SMART WRKY_cls 240 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0080 591 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0080 Lan-Chr1 634830 638681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0080 28 531 WRKY Transcription Factor Family AT1G18860 41.499 2.12e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan1g0080 WRKY 3.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0080 - - pvu:PHAVU_003G192000g 560.836