Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0079 ATGTTCAACTTTGTTGTGAACAGAGGAGTTAAAGCTGCTTCAGTTCAACGCATATACAACACTTTCGCTTCTTTCAACCTCCCTCGCTATGTATCATCCTTTGCCACAGTTGATGCTGAAAAGATATCTGGTTCTAGTCCTGCTGAAGTTTTGAACTTGGTGCAGGGCAAATGGGTAGGATCTTCTAACTATAATACAATTGTGGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCCGAAGTCGACGAAACAGGCATTCAGCCATTTGTTGAAAGCTTGTCCAGCTGCCCCAAACATGGAGTGCACAATCCTTTTAAGGCGCCCGAAAGATATCTTATGTTGGGAGATGTAACTACTAAGGCAGCTCACATGCTATCCCTTCCTAAGGTTTCTGATTTCTTTACAAGGCTTATACAAAGAGTTTCGCCGAAGAGTTACCAGCAGGCTCATGGGGAAGTTTTTGTAACTAGGAAATTTTTGGAGAATTTCTGCGGAGATCAGGTCCGTTTCCTGGCAAGGTCTTTTGCAGTACCTGGAAATCATCTTGGACAGCAAAGTCACGGTTTCCGTTGGCCATATGGTCCGGTGGCGATTATTACACCTTTTAATTTTCCATTGGAGATTCCAGTCCTTCAATTGATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGTAAGGTGAGCATTGTCATGGAGCAATTTTTGCGTCTGCTTCATACCTGCGGTTTACCTGTAGAAGATGTTGACTTCATCAATTCTGATGGGAAGACAATGAACAAGCTTTTACAGGAGGCGAATCCACAAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTCGATTTGAAGGGCAAAATTAAACTGGAAGATGCTGGATTTGACTGGAAAATACTAGGCCCTGATGTCGAACAGGAAGATTACATCGCATGGGTCTGTGACCAGGATGCATATGCATGCAGTGGTCAAAAGTGCTCTGCACAATCATTGCTATTTCTGCATGAGAACTGGTCTCATACTTCCTTCATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGATGACTTGACAATTGGCCCAGTTCTCACTTTTACAACTGAATCAATGCTAGAACACATGAATAAATTACTCGAGATACCAGGCTCAAAGCTGCTCTTTGGGGGTCAGCCTTTAAAGGACCATTCAATCCCGTCAATTTATGGTGCTATTAAACCAACTGCTGTTTATGTTCCTCTTGAGGAAATTGTTAAGGACAACAATTATGAACTCGTGACCAAAGAAATATTTGGACCTTTTCAGATTATTACTGACTACAAGAGCAATCAATTACCAATTGTGTTGGATGCTTTGGAAAGAATGCATGCTCATTTAACAGCTGCTGTAGTATCAAATGATCCTCTCTTTTTACAGCAAGTGATTGGAAACACAGTAAATGGCACTACTTATGCTGGTCTTAGAGCAAGGACTACCGGAGCACCACAAAATCACTGGTTTGGGCCTGCTGGGGACCCTAGGGGTGCAGGAATTGGAACCCCAGAGGCTATAAAACTCGTATGGTCTTGCCACAGAGAAATTATCTATGATATTGGACCAGTGCCAAAGAATTGGGAAGTTCCTTCATCAACTTGA 1659 0.4213 MFNFVVNRGVKAASVQRIYNTFASFNLPRYVSSFATVDAEKISGSSPAEVLNLVQGKWVGSSNYNTIVDPLNGDSFIKVAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMLGDVTTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAHGEVFVTRKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQFLRLLHTCGLPVEDVDFINSDGKTMNKLLQEANPQMTLFTGSSRVAEKLAVDLKGKIKLEDAGFDWKILGPDVEQEDYIAWVCDQDAYACSGQKCSAQSLLFLHENWSHTSFISKLKDLAERRKLDDLTIGPVLTFTTESMLEHMNKLLEIPGSKLLFGGQPLKDHSIPSIYGAIKPTAVYVPLEEIVKDNNYELVTKEIFGPFQIITDYKSNQLPIVLDALERMHAHLTAAVVSNDPLFLQQVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPVPKNWEVPSST* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0079 552 SUPERFAMILY ALDH-like 52 520 IPR016161 GO:0016491
Lan1g0079 552 CDD ALDH_F12_P5CDH 52 540 - -
Lan1g0079 552 Pfam Aldehyde dehydrogenase family 66 494 IPR015590 GO:0016491
Lan1g0079 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 303 493 IPR016163 GO:0016620
Lan1g0079 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 43 302 IPR016162 GO:0016491
Lan1g0079 552 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 30 551 IPR044638 GO:0004029
Lan1g0079 552 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 30 551 - -
Lan1g0079 552 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0079 Lan-Chr1 621334 626382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0079 1 552 Aldehyde Dehydrogenase Gene Family AT5G62530 79.496 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0079 K00294 - gmx:100806579 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1263 12 18520798 18528029 Lan1g0079 1 621334 626382 LSH