Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0077 ATGACTCTTTTTTCACTTCACAATCAGAATCAGAATCAAAATCAAACCACTTCTTCTCACTCTCTTCATTCTCATTTCCTTTCTTCATCTGCTCCTTTTCTAGGTTCAAGATCCATGGTGAGTTTTGAAGATGTTCAAGGAGGGAAAGGGTATAACAGATCCTTCTTCACCGCTTTTGATCCTGATGAAAATGTTGACCAAGTGTACTTTCACCAACCTGAGAAGAAGCGGCGTCTCTCTGCGAATCAAGTTCAGTTTCTTGAGAAAAGCTTCGATGAGGAGAACAAGCTTGAACCTGAGAGGAAAACTAAGCTAGCTAAGGATCTTGATTTGGAGCCACGCCAAGTTGCTATTTGGTTTCAGAACCGTCGTGCACGGTGGAAGACTAAACAGCTTGAGAAGGAATATGAATCATTGCAGGCTAGTTTTGACACTCTTAAGGCCAACTATGATGACCTCCTCAAAGAGAAAGAAAAGTTAAAATCAGAGGTGGCAAACCTTACAGAAAAGGTACTTGTAAGAGAGCAACAAGGATTGGAGGAAGCACTCGAAAAGCCTTTGATTGAATCAGTTTCGGAAGGTGAAGGGTCAAAGGTTTGTGTTGAGGGTTGTAAACAGGAAGAGATTAGTTCAGCCAAGAGTGACATATTGGATTCTGAAAGTCCTCATAATTATGTGGATGGTGTTCACTCTACAATGCTGGAGCTGAGTGATTCTTCTTATGTATTTGAAGCAGATCAACAAGATATTTCACAAGATGAAGAAGATAAATTGAGCAAGAACCTCTTCCCTCATCAACCATATATCTTTCCCAAGTTTGAAGATGTTAATTACTCTGACCACCCTGGAAGTTCTTGTAACTTTGGATTTACTGATGAAGATCATGCCCTTTGGTCCTCTTGGTCTTACTAA 912 0.4035 MTLFSLHNQNQNQNQTTSSHSLHSHFLSSSAPFLGSRSMVSFEDVQGGKGYNRSFFTAFDPDENVDQVYFHQPEKKRRLSANQVQFLEKSFDEENKLEPERKTKLAKDLDLEPRQVAIWFQNRRARWKTKQLEKEYESLQASFDTLKANYDDLLKEKEKLKSEVANLTEKVLVREQQGLEEALEKPLIESVSEGEGSKVCVEGCKQEEISSAKSDILDSESPHNYVDGVHSTMLELSDSSYVFEADQQDISQDEEDKLSKNLFPHQPYIFPKFEDVNYSDHPGSSCNFGFTDEDHALWSSWSY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0077 303 Pfam Homeobox associated leucine zipper 130 171 IPR003106 GO:0006355|GO:0043565
Lan1g0077 303 SUPERFAMILY Homeodomain-like 59 132 IPR009057 -
Lan1g0077 303 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 11 299 IPR045224 GO:0003700
Lan1g0077 303 Pfam Homeodomain 75 128 IPR001356 GO:0003677
Lan1g0077 303 ProSitePatterns 'Homeobox' domain signature. 105 128 IPR017970 GO:0000981|GO:0006355
Lan1g0077 303 Gene3D - 125 175 - -
Lan1g0077 303 CDD homeodomain 75 131 IPR001356 GO:0003677
Lan1g0077 303 Gene3D - 78 124 - -
Lan1g0077 303 ProSiteProfiles 'Homeobox' domain profile. 70 130 IPR001356 GO:0003677
Lan1g0077 303 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54 11 299 - -
Lan1g0077 303 SMART HOX_1 73 134 IPR001356 GO:0003677
Lan1g0077 303 MobiDBLite consensus disorder prediction 1 22 - -
Lan1g0077 303 Coils Coil 122 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0077 Lan-Chr1 613137 614874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0077 17 246 Homeobox Transcription Factor Family AT3G01470 39.167 2.54e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan1g0077 Homeodomain 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0077 - - gmx:732618 378.637