Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0075 ATGGAAAAAATGGGCACTGTTGCATGTGTTTTCTTCGTGATTTTGACTTCAGTTTTCTGCCCCTACTCTCTTGCTCTCACCCTAGATGGTGTGACATTGTTGGAAATCAAAAGCACTTTGAATGACACTAGGAATGTACTGAGTAACTGGCAAGAGCTAGATGAATCTCCCTGTACATGGACTGGTATCACTTGTCATCTCGGCGAACAACGAGTTCGCGAAATAAATTTGCCATATATGTATCTTGGAGGAATTATCTCTCCCAGCATTGGTAAACTCAGCAGACTTCAGAGACTGGCACTTCATCAGAATGGCTTGCATGGTATTATTCCTAATGAAATTACCAATTGTACTGAGCTGAGAGCACTGTACTTGAGGGCTAATTATTTCCAAGGAGGGATACCATCAAGTATTGGAAATCTTTCATTTTTAAACATACTGGATTTATCAAGCAACTTATTGAAAGGTGCTATACCTTCCACTATCGGTGGTCTCTCACATTTGCAACTTCTGAACTTGTCTACCAACTTCTTCTCTGGTGAAATTCCTGACATTGGAGTACTTAGCACCTTCGGGAACAACTCGTTTATTGGCAATTCAGCTCTTTGTGGGAGGCAAGTTCAAAAGCCCTGTCGGACAACACTTGGTTTCCCTGTGGTGCTACCACATACTGAAAGTGATGAAGCTGAAGTCCCTACCAAAAGATCTTCACCTTACACAAAGGTGGTGATAATTGGTGCAATGTCATTGATGGGCCTTGCACTTATCGTAATCCTTTCATTCCTCTGGATTCGTTTGTTGTCAAAGAAGGAAAGAGCTGTGAGGAAATACGCAGAAGTCAAAAAACGACTTGATCCAAAAACAACAGGCACTAAACTTATTACCTTCCATGGTGATCTGCCATACACATCATCTGTGATCATAGAAAAGCTGGAGTCTCTTGATGAAGAGGATGTAGTAGGGTCAGGAGGATTTGGTACTGTCTACCGAATGGTGATGAATGATTGTGGTACTTTTGCTGTTAAACGGATTGACAAAAGTCGTGAAGGGTGTGATCAAGTGTTTGAAAGAGAGCTAGAGATCTTGGGGAGCATCAAGCACATAAATTTGGTGAACCTGCGTGGTTATTGCAGGCTCCCTACTTCAAGGCTCCTCATATATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTACACGAAAATACTGAACAAGTACTGACTTGGAGTGATCGCTTAAAGATAGCCCTCGGTTCTTCTCGGGGTTTGGCATATTTGCACCATGAGTGCTGTCCCAAAATTGTGCATCGTGACATAAAATCTAGCAATATCCTCCTTGATGAAAACATGGAACCTCATATTTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACCACAGTGGTTGCTGGCACATTTGGGTATTTGGCGCCAGAGTATCTACAAAGTGGGAAAGCCAATGAAAAGTCAGATGTATATAGCTTCGGAGTGCTATTGCTAGAACTTATAACTGGAAAGAGGCCTACCGATCCTTCCTTCGTGAAGAGAGGTTTAAACGTTGTCGGCTGGATGAACACATTACTAAAAGAAAATAGATTGGAAGTTGTGGTAGACAAAAGGTGCATAGATGCTGATGTGGGAAGTCTGGAAGTACTACTAGATGTAGCAGCAAGATGCACAGATGCAAATGCGGATGATCGTCCATCCATGAACCAGGTGCTACAAATCCTGGAACAAGAGATCATGTCTCCGTGCCCGACTCACATTCAGATCATTCTTAAATGA 1800 0.4222 MEKMGTVACVFFVILTSVFCPYSLALTLDGVTLLEIKSTLNDTRNVLSNWQELDESPCTWTGITCHLGEQRVREINLPYMYLGGIISPSIGKLSRLQRLALHQNGLHGIIPNEITNCTELRALYLRANYFQGGIPSSIGNLSFLNILDLSSNLLKGAIPSTIGGLSHLQLLNLSTNFFSGEIPDIGVLSTFGNNSFIGNSALCGRQVQKPCRTTLGFPVVLPHTESDEAEVPTKRSSPYTKVVIIGAMSLMGLALIVILSFLWIRLLSKKERAVRKYAEVKKRLDPKTTGTKLITFHGDLPYTSSVIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDKSREGCDQVFERELEILGSIKHINLVNLRGYCRLPTSRLLIYDYLAMGSLDDLLHENTEQVLTWSDRLKIALGSSRGLAYLHHECCPKIVHRDIKSSNILLDENMEPHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGKANEKSDVYSFGVLLLELITGKRPTDPSFVKRGLNVVGWMNTLLKENRLEVVVDKRCIDADVGSLEVLLDVAARCTDANADDRPSMNQVLQILEQEIMSPCPTHIQIILK* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0075 599 Gene3D Transferase(Phosphotransferase) domain 1 390 590 - -
Lan1g0075 599 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Lan1g0075 599 PANTHER RECEPTOR-LIKE PROTEIN 55 3 593 - -
Lan1g0075 599 Pfam Leucine rich repeat 119 176 IPR001611 GO:0005515
Lan1g0075 599 PANTHER LRR RECEPTOR-LIKE KINASE 3 593 - -
Lan1g0075 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Lan1g0075 599 SMART serkin_6 314 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0075 599 ProSiteProfiles Protein kinase domain profile. 314 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0075 599 Gene3D Phosphorylase Kinase; domain 1 276 389 - -
Lan1g0075 599 SUPERFAMILY L domain-like 29 188 - -
Lan1g0075 599 SUPERFAMILY Protein kinase-like (PK-like) 295 583 IPR011009 -
Lan1g0075 599 Gene3D Ribonuclease Inhibitor 28 213 IPR032675 -
Lan1g0075 599 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Lan1g0075 599 Pfam Protein kinase domain 316 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0075 Lan-Chr1 602468 606461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0075 9 591 Receptor kinase-like Gene Family AT2G35620 48.889 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lan1g0075 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0075 - - gmx:100803920 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1021 1 20568464 20572994 Lan1g0075 1 602468 606461 LSH