Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0062 ATGGAGGAAAAGTGGAAACAGAGAGAGTTCGATTTGGCATCAGTTGCGGATTTGTGTTCAGGTTCTTCTTCATCTTCGCCTGGGAAAGCTCGCTTCACTTTCGATGGCCTTCAAATCCTTCAGGATTCTCATCAGATTCTCGTCAACGTAGATCTCCTAACAGCTCAGGTATTCAAGTTAGGTCCTGTTCAATCGGTTTGTATAGTGGAAGAAGGCTCTGATGTTGTTAAAAAGACATCATATTCCAAGGGAGCCACTTTGCAGTTCAGAAATGAGGAGGACAGTGCTGCCTTCCATTGTGTAGTCCAACAATGGAAGAAGGAAGGCAAAGTTCAAGGAGGAAACTTACTAAATGGAACTGTTGTAACTTCTAAAAGTAAATTTGATGAGAAGATAGAGTCATCCTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCACCAGCAAAATATGCTGCAGGACTATGTGCGGACAGGAACCTATTATGCTGCTGTTATTGAGAACCGTGCCGATTTCATGGGTCATGTAGTAGTTGATGTTGGCGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACAGAAGCTTATCGCTGGGAATCCAACCCTTGCTCAACGAATTACAGTGATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAAAAAGCAGATGTTCTTATCTCTGAGCCTATGGGCACCTTATTAGTTAATGAAAGAATGCTAGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCTGCAGTGGGAAGGATTCACATGGCACCTTTCTCTGATGAATATTTATTTATTGAAATAGCCAATAAGGCCCTGTTTTGGCAGCAGCAAAACTATTACGGTGTTGATTTGACGTCCTTACATGGGACTGCATTTCAAGGTTATTTTTCTCAGCCCGTGGTGGATGCTTTTGATCCAAGATTGTTAGTAGCTCCTCCAACGTTCCATGTGATAGACTTCACCAAAATAAAGGAAGAAGACTTGTATGAAATTGACATTCCTCTGAAATTCACAGCCTCTGTGGGTGCCAGAGTGCACGGGTTGGCATGTTGGTTTGATGTACTATTCAATGGAAGTACTGTGCCAAGGTGGCTTACCACTGCTCCTGGTTCACCAACAACCCATTGGTACCAATTACGTTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCTCACAATGCACAGAGTTATACTATATATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGTATTCTTCAAACATCATCCTGTAAGCTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCACAAGCTTATGCATTAGCCCAAGATCAGCAGCAACCACAGCCACTCCTACAGACACAGGATATACACATCCAATCTCAGGACTTGAATGAATCCGAAATAATGCAACAACCTTCGCCCAATTCATCTGTTCCGATTAATTCACTGATGCAGAATATTTAA 1602 0.4182 MEEKWKQREFDLASVADLCSGSSSSSPGKARFTFDGLQILQDSHQILVNVDLLTAQVFKLGPVQSVCIVEEGSDVVKKTSYSKGATLQFRNEEDSAAFHCVVQQWKKEGKVQGGNLLNGTVVTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFMGHVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYAQKLIAGNPTLAQRITVIKGKVEDVELPEKADVLISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPAVGRIHMAPFSDEYLFIEIANKALFWQQQNYYGVDLTSLHGTAFQGYFSQPVVDAFDPRLLVAPPTFHVIDFTKIKEEDLYEIDIPLKFTASVGARVHGLACWFDVLFNGSTVPRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQQPQPLLQTQDIHIQSQDLNESEIMQQPSPNSSVPINSLMQNI* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0062 533 Pfam Ribosomal protein L11 methyltransferase (PrmA) 176 249 - -
Lan1g0062 533 MobiDBLite consensus disorder prediction 513 533 - -
Lan1g0062 533 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3 488 IPR025799 GO:0016274|GO:0018216
Lan1g0062 533 Gene3D - 282 490 - -
Lan1g0062 533 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 133 448 IPR025799 GO:0016274|GO:0018216
Lan1g0062 533 CDD AdoMet_MTases 179 279 - -
Lan1g0062 533 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 3 488 - -
Lan1g0062 533 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 143 454 IPR029063 -
Lan1g0062 533 Gene3D Vaccinia Virus protein VP39 119 280 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0062 Lan-Chr1 327755 334113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0062 95 429 C2H2 Transcription Factor Family AT3G12270 33.428 8.92e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0062 K05931 - gmx:100780736 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1016 1 20535546 20542645 Lan1g0062 1 327755 334113 LSH
Lan1g0062 1 327755 334113 Lan4g0079 4 1029506 1036842 PCT
Lan4g0079 4 1029506 1036842 Lan1g0062 1 327755 334113 PCT