Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0057 ATGGATTTGTTAAAACAGGAGATAAACAACATGGTAGGTTCTGAAGGAGAACTTAAAATAAGCTTTGGGTATCAATGTAATAGTGATAGAGGTATCCCTTGTGAAGTTTCTCATGGCTTCAAAATCCTTCCGGAAGTACGTAGAACTAGCAGCTTCTCTTGCTTATCGGGTGCAGCCTTAAGTGCAAATGCTACACTAGCCAACACCAACATCTGCAATGGTAAGATAGGAGGGGAAATCCTTCCAACTTGGGACTCTCCTAATTCGTTTCGCAAGATACCCTCTTCGCCGAGTCTTTCAAAGTTGGACAGGCTATCATCTTCTCTACCAAGTAGTTTGTCTTACCTAAGCTGTAGCCCTTCCACTTCAAGTGATATACTTGAATATGACGGTTGCGCATTGAAGTTCATGAGCGATCCATCTAGAGGGGAAGGTTTTCTTAATGCTACCGAATTACAAGTAGCTGGAGGAGCTGCTGGTGAAGATAGAGTTCAGGCAGTTTGTTCCGAAGAAAATGGATGGCTCTTTTGTGCAATTTACGATGGCTTTAATGGGAGAGATGCCGCTGACTTTCTGGCTGGTACCCTGTATGACACTATCATATCTTGCTTAGATAAGTTACATTGGGAGTCAGAGCCGGCTTCTGTTAAAGCTTACAACGATGTGGGTTTGGATGATAGTCTTATTTGTCATGATGGTCAATCTTTTCCAAGATTAAATGGAAATAATGATTCTAATCTTGGCTGTTTTGTAAAGAGTGGTCCATCTGCTAATTTGGAATTATCATGTAAATCATTTTCACAAGGGGTACTAGATAGCCTTCAATGTGCTCTTAATCAGGCTGAGAATGATTTTTTGTACATGGTTGAGCAAGAAATGGAGGAACGGCCAGATTTAGTTTCAATCGGATGTTGTGTTTTACTTGTGCTTCTCCATGGCAATGATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACATGTAGCACAGGTGAAAGAATGAATGAGAGTGGGAGACTCGAAGCTATTCAGCTTACAGATAGTCATACTGTTGACAATGAAGCTGAAAGAGCTAGAGTTGTGGCTAATCATCCAGATGATCCCAAGGTCATCGTAGCTGGAAAAGTAAAAGGAAAACTGAAGGTTACTCGCGCTTTTGGAGTCGGTTACTTGAAAAAGAAAATTCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGTGATCTTATAAGCCCACCTTATGTTTCCACTGAACCATCATTGAATGTCCATAAAATCTCAAATTCTGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGACGAGGCAGTGATGCTCGTAGAGTCTTATATCTTTGGCAATCCTTGGGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTAATTCTGCAGGATTCAGCTTGGAAGAGTTAATGAATGTTCCAGCCGGAAGGAGAAGGAAGTACCACGACGATGTGACTGTAATTGTGATCATGCTTGGGATGACTCAGCGGACTTCGAAGGCGTCAACTTGCATCTAA 1581 0.4149 MDLLKQEINNMVGSEGELKISFGYQCNSDRGIPCEVSHGFKILPEVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPTWDSPNSFRKIPSSPSLSKLDRLSSSLPSSLSYLSCSPSTSSDILEYDGCALKFMSDPSRGEGFLNATELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISCLDKLHWESEPASVKAYNDVGLDDSLICHDGQSFPRLNGNNDSNLGCFVKSGPSANLELSCKSFSQGVLDSLQCALNQAENDFLYMVEQEMEERPDLVSIGCCVLLVLLHGNDLYTLNLGDSRAVLATCSTGERMNESGRLEAIQLTDSHTVDNEAERARVVANHPDDPKVIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYVSTEPSLNVHKISNSDQFVIVGSDGLFDFFSNDEAVMLVESYIFGNPWGDPAKFLIEQLVARAANSAGFSLEELMNVPAGRRRKYHDDVTVIVIMLGMTQRTSKASTCI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0057 526 SUPERFAMILY PP2C-like 160 514 IPR036457 -
Lan1g0057 526 CDD PP2Cc 159 511 IPR001932 -
Lan1g0057 526 Pfam Protein phosphatase 2C 264 460 IPR001932 -
Lan1g0057 526 PANTHER PROTEIN PHOSPHATASE 2C 9 525 IPR015655 GO:0004722|GO:0006470
Lan1g0057 526 SMART PP2C_4 137 511 IPR001932 -
Lan1g0057 526 Gene3D - 118 522 IPR036457 -
Lan1g0057 526 ProSiteProfiles PPM-type phosphatase domain profile. 146 513 IPR001932 -
Lan1g0057 526 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 9 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0057 Lan-Chr1 310480 313154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0057 16 526 PP2C-type Phosphatase Gene Family AT3G16560 63.127 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0057 - - gmx:100808304 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0057 1 310480 313154 Lan16g1175 16 19122673 19126657 PCT
Lan16g1175 16 19122673 19126657 Lan1g0057 1 310480 313154 PCT