Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0042 ATGTTGAAATCTTGTCACAAATTCCTCTTGTTCCACTTCAATGGATTACCAAGGGTTCTTTCTTATTCTCCAATTGGAACTCTCAACTACACAACAACAACAAAAGATGAATCTTTTACTGTGAACTACCTCGTCAACAATTGTGGGTTCCCCTTAGATTCCGCTTTAACTGCTTCCAAACAAATTCTTATTCGTTCCTCCGAAAACCCCGATTCAGTTCTCGCATTGTTCCGCAGCTTAGGTTTCTCAGATTCCGATTTGCAAATTATCATTCGAAAGATACCAAGGCTTCTTCTCAGTAATCCCACGAAAACCCTTTTGCCAAAGTTTCAATTTTTCCAATCCAAAGATGCTTCAGCCTCCCATTTTGTTCGCATTTTCACTGCAAATCCTTACTTATTACTCAGAAGCTTAGAGAATCATTTAATTCCTACTTACAATTTGATATACCGATACCTTCAATCCGATCAAAGGACCCTTGTTGCTGTAAAACGTTGTGTAAGGCTCTTTGATTTTGCTGACCTGCAAAATAATATCAAGTTATTGCTTGATGCTGGGATTCGTGAGGAGAGTTTGGCGATGCTATTTCGCCAATGGCCGTGGTTACTCGTCTATAAATTTGATTACCTTAGAAATAAGGTAGATGAAATCAGGAACATGGGACTTGATCCTTCGAAATCACGTTTCATTGCTGCAATGTATGCGAAGGCGCTGCCTAAGTCCATGTGGGAAAGCAAGGCCGAGTTATATAAGATGTGGGGATGGACGGATGAAGCAATTCACGAGGCATTCGTGCGACATCCTCATTGTATGCTAATATCGGAACGAAAAATTGAAGAGGGCATGCAATTTTTCGTCAACCAAATGGGTTGGGACTCTCAATTGCTTGTTTGTTATCCTGTACTTCTCATGCTGAGTTTGAACAAAAGAATTATTCCAAGAGCTTCTGTCTTGGAATTTCTTCTATCTAAGGATCTGATTGAGCGTGCATTCATTCCACAAGCATATTACATTTCTGAAGAAAAGTTCCTTCAGAAGTATGTTAGCAGTTTTAAAGATCAAGCACCTCAGTTATTGAAGCTTTATGAGGAGAAAATGAGTCTTTCAGGAACGGATGATCAATGTTTGTCTTGA 1134 0.3942 MLKSCHKFLLFHFNGLPRVLSYSPIGTLNYTTTTKDESFTVNYLVNNCGFPLDSALTASKQILIRSSENPDSVLALFRSLGFSDSDLQIIIRKIPRLLLSNPTKTLLPKFQFFQSKDASASHFVRIFTANPYLLLRSLENHLIPTYNLIYRYLQSDQRTLVAVKRCVRLFDFADLQNNIKLLLDAGIREESLAMLFRQWPWLLVYKFDYLRNKVDEIRNMGLDPSKSRFIAAMYAKALPKSMWESKAELYKMWGWTDEAIHEAFVRHPHCMLISERKIEEGMQFFVNQMGWDSQLLVCYPVLLMLSLNKRIIPRASVLEFLLSKDLIERAFIPQAYYISEEKFLQKYVSSFKDQAPQLLKLYEEKMSLSGTDDQCLS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0042 377 PANTHER CGI-12 PROTEIN-RELATED 32 370 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 Pfam mTERF 175 343 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 Pfam mTERF 74 179 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 32 370 - -
Lan1g0042 377 SMART mt_12 193 223 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 SMART mt_12 10 51 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 SMART mt_12 293 327 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 SMART mt_12 88 119 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 SMART mt_12 124 156 IPR003690 GO:0003690|GO:0006355
Lan1g0042 377 Gene3D Transcription termination factor 3, mitochondrial 155 355 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0042 Lan-Chr1 227965 229098 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan1g0042 mTERF 8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0042 K15032 - pop:7491317 296.204