Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0029 ATGTTGGACCGTTTATTACCTAAATTGAAGGCGACAGATCATCGGGTTCTTTTCTTTTCGACAATGACTAGGCTTCTGGATGTTATGGAGGAATACTTAACCTTAAAACAATATCGGTACCTCCGGCTGGATGGGCATACATCAGGAAGTGATCGCGGTGCCCTTATTGATCTTTTTAACCAATCTGATTCTCCATACTTTATTTTTCTACTCAGCATTCGAGCTGGTGGTGTTGGAGTTAATCTTCAAGCTGCTGACACAGTGATCTTATTCGACACTGACTGGAATCCACAGGTTGATCTGCAAGCCCAGGCAAGGGCTCATAGAATTGGTCAAAAGAGGGATGTTCTTGTTCTTCGGTTTGAAACAGTTGAAACTGTTGAAGAACAAGTCAGAGCTTCGGCTGAGCACAAACTTGGTGTCGCTAATCAGAGCATTACTGCTGGGTTTTTTGACAATAATACAAGTGCTGAAGATCGTAGAGAATACTTGGAATCCCTCCTGCGTGAGTGTAAGAAAGAGGAAGCTGCACCTGTTTTGGATGATGACGCTCTTAATGATATCTTAGCCCGCAGGTACCCGATTTTTTTTATGCTTTCACCATCTATCTATTCATGGCTTGGTACATGTTCTTATTTTGTGATGAGTAACTGGGTTGCGTGCATTTCTTTCTCTACTTTCATATATAGTTTGACCATTTTTTTTAGAATGGTAACTTGGTCGGATTATTTAGAATTAATGGAAATCTGGGAAAGATGTGTACATGACTTATTTTACCTCCGTTTAAATTCATTCTACCCTGTTAGCCATTGTTGTTTTAATTCACAGATTGTCATGTTACATTCTATGAAGAAAGAAGGGATGAATGAGATTCCATATGTGAAAAGGTTCAGTCTGATAGAGCTGCAAGTCTCTGGTAGAATATGTGATCCTTAA 936 0.3974 MLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLTLKQYRYLRLDGHTSGSDRGALIDLFNQSDSPYFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVETVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPVLDDDALNDILARRYPIFFMLSPSIYSWLGTCSYFVMSNWVACISFSTFIYSLTIFFRMVTWSDYLELMEIWERCVHDLFYLRLNSFYPVSHCCFNSQIVMLHSMKKEGMNEIPYVKRFSLIELQVSGRICDP* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0029 311 PANTHER SNF2/RAD54 HELICASE FAMILY 1 192 - -
Lan1g0029 311 PANTHER CHROMATIN STRUCTURE-REMODELING COMPLEX PROTEIN SYD 1 192 - -
Lan1g0029 311 CDD SF2_C_SNF 1 121 - -
Lan1g0029 311 Coils Coil 154 174 - -
Lan1g0029 311 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 147 IPR001650 -
Lan1g0029 311 Pfam Helicase conserved C-terminal domain 3 111 IPR001650 -
Lan1g0029 311 SMART helicmild6 27 111 IPR001650 -
Lan1g0029 311 Gene3D - 1 194 IPR027417 -
Lan1g0029 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 169 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0029 Lan-Chr1 151205 153960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0029 4 169 RAD5 or RAD16-like Gene Family AT5G43530 37.500 2.92e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0029 - - lang:109355952 629.787