Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0028 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGGAATTGCTGAAAAGAAGATGGAAAGCAGGGATTTTATGGGGGCTCGTAAATTCGCTCTTAAGGCCCAGCAGCTATATCCTGATGTGGAAAATATAGCTCAGATGCTTACTGTTTGCGAGGTGCACTGCTCTGCTCAGCAGAAATTGTCTAACAGTGAGATGGACTGGTATGGAATTCTTCAGGTTGAACAGACTGCTAATGATATAACAATTAAGAAGCAGTACAGGAAGTTTGCCCTCCAGCTTCATCCGGACAAAAATCAGTTTTCTGGTGCAGAAGCTGCATTTAAGCTAATTGGGGAGGCTCAAAGAATACTTTTGGATAGAGAAAAACGATCCATGCATGACTTGAAGCGTAGAGGAGCATCTATTAACAAAACTGCTACGTCACATCATAATCAACAGAAAACCAATGTCAGGCCCAATTCTAAAAAACCAAATCCTCAGCCACAAAAGCCCCAGCAGCAGCAGTCTAGGCAGCAAGCTCAGCAGGGGGTCAATGGTGTCCGTCCTACTTTTTGGACTGCCTGCCCATTTTGTTCTGTTAAGTATCAGTATTACAGAGAAGTTTTGAATAAGTCTCTTCGATGTCAACATTGCAGTAGGCCTTTCATTGCTTATGCTGTAAATATTCAAGGTACATCACCAGCAACTAATTCCAGCCAGCATCCCTCTGGCCAGCAGAAAAGTGGTATGAATCATGGTGATTTCAAGGCTGGTGTTGGTTCTCAAGGCAATTTGCATGGCAAGAAATCCAACACAGAGCCTTTTGAGAAAAAAATCCCCAGGGATGTGTCCGGAAAGCCGAATGGAAAGAGGAGGAAACGGGTGACTGAGTCCAGTGAAAGTTCTGATTCTGTAGGCAGCACTGATTCTGAAGATGATGATATGGTTGCTGATGAGGATGGTTTTCCTGGTGGACAAAACCATTCAACTAATAGAGAAGAGCAGCCACGCAGATCTACACGGCAAAAGCATGATGTGTCCTACCAGGATAATGCGAGTGACAACAATGATGACTTCCCAAGACCTTCTAAACGGGTTAAGGAGAGTGGGTCACCATGCATGTCAGCTAAGTCAAATGATCAGCATGGTTTAGCTGCTGATCTGAAAAATGATAAAGATGTAAAACAGAAGCAAACTTCACAGAATTATTCTCCGGATTCAATTGCCAAAGCAACAAATGATCCAAATCATTTTGTCTTTCCTGATGCAGAGTTCAGCGACTTTGATAAGGACAAGAAAAAAGAATGTTTTGCAGCTGGGCAGATTTGGGCTATTTATGATACAATAGATGGCATGCCTAGATTCTATGCTTTAATCAGAAAAGTTCTCTCTCCTGGATTCAAGCTGAAGATAACATGGTTTGAGCCAGATCCAGATGACAAAGATGAAATGAACTGGGTCGACGGGGGATTGCCTGTTGCTTGTGGGAAATATAAATTTGGTGCCACTCAAATCAGTCAAGATCATCTTTGCTTCTCTCATTTGGTTTTGTGTAAAAGTAATGGTCCTGATGCTTTTAAAGTGTCTCCTAGAAAGGGAGAAACTTGGGCTCTTCTTAAAAATTGGGATATCAAATGGTACAAAGATGTGGAATCTCATCAGCAGTATGAGTTTGAGTTTGTTGAAATCTTGTCAGATTATGTTGAAGGTGAGGGTGTATCTGTTGCATACTTGGCTAGGTTGAAAGGTTTTGTAAGTCTCTTTATGAAGGGAGATGTCCACTCATTCCGAATTCGACCAACGGAGTTATTTAGGTTCTCTCACAGGGTTCCATCCTTTAAAATGACTGGTCAGGAAGGAGTTGGTGTTCCGGTAGGATCTTATGAACTTGATCCTGCATCTTTGCCAATGAATCTTGAAGAAATTGCTGTTCCTGAAAGAAGTAATCTGGCTGAGAAGAAAAAGGATTCTGTTCATGGTATTGATGAAAATCCTGAAGCTATTAAAATTCCAGATCCCCAGTTCTTTAATTTTGACGATGAGAAGTTCATTGAAAAGTTTCAGGTTGGTCAGATTTGGGCATTTTACAGTGATGAGGATGGATTGCCAAAATACTATGGTCAAATTAACAGGATTAAGACTAGCCCAGAGGTTGAACTGCATGTTAATTGGCTTACTTGCTGCTGGTTACCAGAGAATACTACTAAATGGGAAGATGAAGACATGCTTATTTCCTGTGGCAGATTCAGAGTTAATAAAACAAGTGCATATCACAATGTTTATAGCAGCACCTCATCTTTTTCACATCTGGTGCTTGCTGATCCTGTTGATAAAAAAAAGAATTATGATATCTATCCAAGGAAAGGTGAAGTATGGGCACTATATAGAAAATGGTCTAGTAAAATCAAATCTTCAGACTTGAAAAACTGGGAGTATGACATTGTGGAAGTTCTTGGAGGAAATGATTTGTTTTTTGATGTGTTAGTTTTGGCGTTTGTCAGTGGTTTTAATTCAGTTTTCAGGGGCAAATCAAATGAAGGATCAGCCGTCACCCTGAGAATACCCAGGAAAGAGTTGCTTAGGTTCTCTCACCAAATCCCCGCTTTCAGATTAACAGAAGAGCAAGGCAATCTGAGAGGCTTTTGGGAACTTGATGCAGGAGCACTACCAGTTTTTTATAATGGCGCTGGCTCGAAATGA 2682 0.4113 MDCNKEEALRAKGIAEKKMESRDFMGARKFALKAQQLYPDVENIAQMLTVCEVHCSAQQKLSNSEMDWYGILQVEQTANDITIKKQYRKFALQLHPDKNQFSGAEAAFKLIGEAQRILLDREKRSMHDLKRRGASINKTATSHHNQQKTNVRPNSKKPNPQPQKPQQQQSRQQAQQGVNGVRPTFWTACPFCSVKYQYYREVLNKSLRCQHCSRPFIAYAVNIQGTSPATNSSQHPSGQQKSGMNHGDFKAGVGSQGNLHGKKSNTEPFEKKIPRDVSGKPNGKRRKRVTESSESSDSVGSTDSEDDDMVADEDGFPGGQNHSTNREEQPRRSTRQKHDVSYQDNASDNNDDFPRPSKRVKESGSPCMSAKSNDQHGLAADLKNDKDVKQKQTSQNYSPDSIAKATNDPNHFVFPDAEFSDFDKDKKKECFAAGQIWAIYDTIDGMPRFYALIRKVLSPGFKLKITWFEPDPDDKDEMNWVDGGLPVACGKYKFGATQISQDHLCFSHLVLCKSNGPDAFKVSPRKGETWALLKNWDIKWYKDVESHQQYEFEFVEILSDYVEGEGVSVAYLARLKGFVSLFMKGDVHSFRIRPTELFRFSHRVPSFKMTGQEGVGVPVGSYELDPASLPMNLEEIAVPERSNLAEKKKDSVHGIDENPEAIKIPDPQFFNFDDEKFIEKFQVGQIWAFYSDEDGLPKYYGQINRIKTSPEVELHVNWLTCCWLPENTTKWEDEDMLISCGRFRVNKTSAYHNVYSSTSSFSHLVLADPVDKKKNYDIYPRKGEVWALYRKWSSKIKSSDLKNWEYDIVEVLGGNDLFFDVLVLAFVSGFNSVFRGKSNEGSAVTLRIPRKELLRFSHQIPAFRLTEEQGNLRGFWELDAGALPVFYNGAGSK* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0028 893 Pfam Domain of unknown function (DUF3444) 410 613 IPR024593 -
Lan1g0028 893 Pfam Domain of unknown function (DUF3444) 659 868 IPR024593 -
Lan1g0028 893 PANTHER - 1 647 - -
Lan1g0028 893 PANTHER - 640 888 - -
Lan1g0028 893 SUPERFAMILY Chaperone J-domain 62 130 IPR036869 -
Lan1g0028 893 MobiDBLite consensus disorder prediction 134 178 - -
Lan1g0028 893 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 640 888 - -
Lan1g0028 893 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 647 - -
Lan1g0028 893 MobiDBLite consensus disorder prediction 391 405 - -
Lan1g0028 893 MobiDBLite consensus disorder prediction 227 244 - -
Lan1g0028 893 Gene3D DnaJ domain 52 156 IPR036869 -
Lan1g0028 893 MobiDBLite consensus disorder prediction 227 409 - -
Lan1g0028 893 MobiDBLite consensus disorder prediction 135 178 - -
Lan1g0028 893 CDD DnaJ 67 120 IPR001623 -
Lan1g0028 893 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lan1g0028 893 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lan1g0028 893 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lan1g0028 893 MobiDBLite consensus disorder prediction 264 293 - -
Lan1g0028 893 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lan1g0028 893 Pfam DnaJ domain 67 128 IPR001623 -
Lan1g0028 893 SMART dnaj_3 66 123 IPR001623 -
Lan1g0028 893 MobiDBLite consensus disorder prediction 325 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0028 Lan-Chr1 143024 150234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0028 4 221 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.714 2.54e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0028 - - gmx:100795200 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0028 1 143024 150234 Lan19g0647 19 12231040 12235818 PCT
Lan19g0647 19 12231040 12235818 Lan1g0028 1 143024 150234 PCT