Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0016 ATGCTGCCTGATCAGAGAAAAAAGTCCTCTGTAGATGTAGATTTCTTTACAGAATATGGTGAAGGGAGTAGATACAAAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTCTCTGATGCTACCCGCATTCTTCGCGAGATCAAACTTCTTAGACTCTTGCGTCATCCCGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGACTTACACCAGGTCATCAAAGCAAATGATGATTTGACTCCTGAGCATTACCAGTTTTTTCTCTACCAGCTTCTTCGAGGGTTGAAGTATATACACACCGCAAATGTTTTTCACCGAGATCTGAAGCCAAAAAACATTTTAGCAAATGCTGATTGCAAACTGAAGATTTGCGACTTTGGTCTCGCCAGAGTGGCTTTCAATGATACACCAACTGCTATATTCTGGACTGATTATGTTGCAACAAGGTGGTACAGGGCTCCTGAGTTGTGTGGATCCTTTTTCTCGAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTCGCTGAACTTTTAACTGGAAAACCTCTTTTCCCGGGGAAGAATGTTGTACATCAGTTGGATATCATGACCGATTTTCTTGGAATACCATCTCAAGAAGCCATTGCTAGGATACGTAATGAGAAAGCACGGAGATACTTGAGCAGCATGCGTAAAAAGAAGCCAGTTCCTTTCTCCCAAAAGTTTCTCAATGCAGACCCCCTTGCTCTTCGTCTGTTAGAAAGAATGCTGGCATTTGAGCCAAAAGATCGACCTAGTGCTGAAGAGGCTCTAGCAGATCCATATTTTAAAGGTTTGGCCAAGGTTGAGAGAGAGCCTTCTGCTCAACCAGTTACCAAGATGGAATTTGAATTTGAGAGACACAGAGTAACAAAGGAAGATGTGCGAGAGCTTATATACCGAGAGGCTCTAGAGTACCATCCAAAGATGTTGAAAGAACATCTAGAGGGAGAAGAACCGACAGGTTTCATGTATCCAAGTGCCGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGAAAAGGTGGAACTGTTACTGCACCTGAGAGGCAACATGCATCACTACCCAGGCAATGTGTGTTATATTCGGATAACTCGAGACAGAATACATCTGAGGTTGCAGATGATCTCTCCAAGTGTAGCATCAAAGAGGTTGAGAGGCCAGCCATAGATAGGAGTGGTGCTATCCCATTCACCAGGATTCCGTCACAAGCTCCTCAAAATATTCAAGCTTCAGGTGTTGCTGCACGACATGGAAAAGTTGTTGGTTCAGCATTGGGTTACAACAACTGTGGGGTAGCAATGACATCAGAGGCCGATCAGCGGAGGACAGTGCAGAATTCATCTGTTTCAGCCCAGTATGCTGCTTCAAGCTGTTCATATCCTAGAAGAAACCCAAGCTGTAAAAATGAGAGGGCAGAAAATAATGGGATTGAGGGTTCTACCGGGCTTCAGCCGAAGCCTCAATACATAGCGCGAAAAGTAGCTGCTGCTCAAGGTGGAGCTGGTGGTAATTGGTATTGA 1695 0.4295 MLPDQRKKSSVDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDFLGIPSQEAIARIRNEKARRYLSSMRKKKPVPFSQKFLNADPLALRLLERMLAFEPKDRPSAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERHRVTKEDVRELIYREALEYHPKMLKEHLEGEEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTAPERQHASLPRQCVLYSDNSRQNTSEVADDLSKCSIKEVERPAIDRSGAIPFTRIPSQAPQNIQASGVAARHGKVVGSALGYNNCGVAMTSEADQRRTVQNSSVSAQYAASSCSYPRRNPSCKNERAENNGIEGSTGLQPKPQYIARKVAAAQGGAGGNWY* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0016 564 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0016 564 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lan1g0016 564 MobiDBLite consensus disorder prediction 516 542 - -
Lan1g0016 564 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0016 564 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Lan1g0016 564 MobiDBLite consensus disorder prediction 516 540 - -
Lan1g0016 564 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan1g0016 564 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Lan1g0016 564 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Lan1g0016 564 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Lan1g0016 564 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Lan1g0016 564 CDD STKc_TDY_MAPK 24 361 - -
Lan1g0016 564 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0016 Lan-Chr1 76350 81130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0016 1 564 MAP Kinase Gene Family AT5G19010 78.646 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan1g0016 Pkinase 6.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0016 - K04371 gmx:100814013 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1307 12 18766597 18771760 Lan1g0016 1 76350 81130 LSH
Lan1g0987 1 20361960 20367752 Lan1g0016 1 76350 81130 LSH