Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0009 ATGGGAAGGGCTGAGAAAATGAGTTGCTTCACATGCTCTCATCCGGACACGCTCTCTTTCAGAACTAGTCCTACCCAAAATTCTAAAGACACTGGAAAAAGAACGTTGAAATCATTTGTCAGAGATATGTCACTTAAATTTAAATCAGATAGAAGCAGGCAGAGACAGATTATTGCAGCAGAGATACTAAAATATGGAACTGCTAAAAATCATGTTGAGGTATTCACATATCAAGAACTGGCTGGTGCAACCGATAACTTCAATCCTGAATGTCTTATTGGCGAGGGTGGATTCGGGAGCGTGTACAAGGGATACATAAAAAGCATTAAACAAAGTGTGGCTGTGAAGCAACAGAACAGGAATGGATTGCAAGGACCGCGAGAATTCCTCGCAGAGGTGCTGATGTTAAGCTTGGTGAAGCACCCTAACCTTGTCAAGCTCATTGGTTATTGTGCAGAAGGTGATCAAAGGATTTTAGTCTATGAATTCATGCCCAATGGAAGCTTGGAAGATCACCTTCTAGATATAGGTGGAGATGAGGAGGGACTAGATTGGGAAAGAAGGATGAAAATAGCAGAAGGTGCAGCTAGAGGACTTGAATATCTTCATGAAACTGCTGATCCACCAGTGATATACCGTGATTTTAAAGCATCAAACATATTATTAGATGAAGATTTCAATCCCAAATTGTCTGATTTTGGACTTGCAAGGATGGGTCCTACAGGAGGCAAGGACCATGTCTCAACAAGGGTCATGGGAACTTATGGTTATTGTGCACCTGAATACGCTTCCACTGGTCAGTTAACTACGAAATCAGATGTTTATAGTTTTGGTGTAGTGCTTTTGGAAACAATCACTGGTAGGAGAGTAATTGACTATCAAAGACCAACAGAGGAGCAAAATTTGATCGATTGGGCACATCCTTTGTTTAAGGACAGAAGCAAGTTCATTCTAATGGCAGACCCTTTGCTTAAAGATAAGTTCCATGTGAAGAGTCTATTTCAAGCACTTGCTGTGGCTGCAATGTGTCTCCAAGAGGAAGCTGATACACGACCTCATATGAGTGATGTTGTAACAGCTCTTCATCATCTAGCAAATCAAAAAATTAGACAAAAAGAGATTCCAAAGGAACCATTCATAAAGAGTGCTGGCCATGTTGAATCATTGGGTGGTTTAAATTCATATATTCACCCATGA 1197 0.4069 MGRAEKMSCFTCSHPDTLSFRTSPTQNSKDTGKRTLKSFVRDMSLKFKSDRSRQRQIIAAEILKYGTAKNHVEVFTYQELAGATDNFNPECLIGEGGFGSVYKGYIKSIKQSVAVKQQNRNGLQGPREFLAEVLMLSLVKHPNLVKLIGYCAEGDQRILVYEFMPNGSLEDHLLDIGGDEEGLDWERRMKIAEGAARGLEYLHETADPPVIYRDFKASNILLDEDFNPKLSDFGLARMGPTGGKDHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVLLETITGRRVIDYQRPTEEQNLIDWAHPLFKDRSKFILMADPLLKDKFHVKSLFQALAVAAMCLQEEADTRPHMSDVVTALHHLANQKIRQKEIPKEPFIKSAGHVESLGGLNSYIHP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0009 398 ProSiteProfiles Protein kinase domain profile. 87 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0009 398 PANTHER OS07G0668900 PROTEIN 7 389 - -
Lan1g0009 398 Gene3D Phosphorylase Kinase; domain 1 72 163 - -
Lan1g0009 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Lan1g0009 398 Pfam Protein kinase domain 92 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0009 398 CDD STKc_IRAK 93 361 - -
Lan1g0009 398 SUPERFAMILY Protein kinase-like (PK-like) 73 370 IPR011009 -
Lan1g0009 398 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Lan1g0009 398 Gene3D Transferase(Phosphotransferase) domain 1 164 383 - -
Lan1g0009 398 PANTHER RECEPTOR SERINE/THREONINE KINASE 7 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0009 Lan-Chr1 34714 37218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0009 72 365 Glycoside Hydrolase AT3G07070 68.367 6.45e-145 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan1g0009 Pkinase 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0009 - - gmx:100305361 520.39