Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0006 ATGGCTGATTTGTTGGACTGGCCTAACAAAGATAACCGTCGCTTCCTTCATGCTGTCTACCGCGTTGGGGATCTTGAGCGCACCATCAAGTTTTATACTGAGAGCCTTGGATTTAAGCTTTTGAGGCAAAGAGATGTTCCAGAGGAGAAATATGCCAATGCTTTTCTTGGGTTTGGTCCTGAAGAATCCTATTTTGCTGTTGAATTAACATACAATTATGGAGTGACCTCATATGACATTGGAGATGGCTTTGTACATTTTGGTATTGCAACTCAAGATGTTTACAAATTGGTTGAAAACATAAGAGCCAAGGGCGGAAAAATCACAAGGGAACCTGGTCCAGTTGAGGGTGGAACAACTATCATTGCCTTTGTAAAGGATCCTGATGGTTACCCTTTTGCACTAATCCAAAGACCTTCAATCACTGATCCATTTGCTCAAATAGCACTTCGTGTTGGTGATTTAGACCGTGCAATTAAGTTTTATGAAAAGGCTTTGGGCTTGAAGGTTGTGAGGAAGGATGATAGGCCTGAGTCCAAGTACACTGTAGCAGCTCTTGGGTATGCAGATGAGAATGAGACAACTGTGTTAGAATTGACATATAATTATGGTGTCACTGAATACTCAAAGGGAGATGCTTATGCACAGATTGCTGTTGGCACTGATGACGTATACAAGACTGCAGAGTTAGTTAAGAAAGTCATAGAAGAAGTCGGAGGGAAGATTATTCGGGAACCTGGGCCCCTTCCCGGCCTTAAAACCAAAATCACTTCTTTCTTAGATCCAGAAGGCTGGAAAACTGCATTCGTTGACAATGAAGATTTCCTGAAGGAACTGCAGCAGTGA 846 0.4232 MADLLDWPNKDNRRFLHAVYRVGDLERTIKFYTESLGFKLLRQRDVPEEKYANAFLGFGPEESYFAVELTYNYGVTSYDIGDGFVHFGIATQDVYKLVENIRAKGGKITREPGPVEGGTTIIAFVKDPDGYPFALIQRPSITDPFAQIALRVGDLDRAIKFYEKALGLKVVRKDDRPESKYTVAALGYADENETTVLELTYNYGVTEYSKGDAYAQIAVGTDDVYKTAELVKKVIEEVGGKIIREPGPLPGLKTKITSFLDPEGWKTAFVDNEDFLKELQQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0006 281 PANTHER LACTOYLGLUTATHIONE LYASE 4 280 - -
Lan1g0006 281 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 4 280 - -
Lan1g0006 281 Gene3D - 141 280 IPR029068 -
Lan1g0006 281 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 146 271 IPR029068 -
Lan1g0006 281 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 144 272 IPR037523 -
Lan1g0006 281 Gene3D - 1 138 IPR029068 -
Lan1g0006 281 ProSitePatterns Glyoxalase I signature 1. 147 168 IPR018146 GO:0004462|GO:0046872
Lan1g0006 281 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 138 IPR037523 -
Lan1g0006 281 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 13 140 IPR029068 -
Lan1g0006 281 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 146 266 IPR004360 -
Lan1g0006 281 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 134 IPR004360 -
Lan1g0006 281 TIGRFAM glyox_I: lactoylglutathione lyase 146 277 IPR004361 GO:0004462|GO:0046872
Lan1g0006 281 TIGRFAM glyox_I: lactoylglutathione lyase 4 145 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0006 Lan-Chr1 23810 25764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0006 147 271 Calmodulin-binding Proteins AT1G08110 27.333 3.71e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0006 K01759 - gmx:100793089 472.241