Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0003 ATGCATATGAGCACGAGTATGGCACAAAAGAAGGCTACTTTCATAGCTTTAGTAACATCATTTTCACTTTTCATTTTCATTTTCATTTCCATTTTCTTTGATTACATAGCTTGCTTAGAAGAAGATCGTTCCATATACTTGGTCTTATTGGAAGGAGATGGTGTTGCTTTTCATCAAGATTCACCAAGAGTTTACCCCAATAGCGGTGCATCCATAGCACATGCAAGGCGATTATTGGAAGAATCTCATGATCTACTTCTCCAAACCACTCTTGATACTGGAACCTACACTAAACTCCACAGCTTCAAACATCATATTAATGGCTTTGCTGTTTACACAACACCTTCTCAGGTTGCAAGACTGAGAGTTATGAAAGGAGTGAAGATGGTGGAGAAAGACAGAGGAGCAAAAATGATGACAACATACACTCCTGAGCTTCTAAGTTTAAGGAAGGGAATATGGGCTCAAGAAGGTGGAGAGATAAATGCAGGTGAAGGAGTTGTGATTGGTTTTGTGGATAGTGGAATCAACCCACTTCATCCCAGTTTTGCTTATGATCCCATGCATACATTCACATCAAATCTTTCTCATTTTGTTCCTACTTGTGAGACGGGCCCACACTTCCCACTTAGTTCTTGCAATGGGAAGATAGTATCAGCTAGGTACTTCTCTGCCGGGGCTGAAGCTACTGCTACCCTTAATGCTTCACTTGATTTTCTTTCACCTTTTGATGCAGATGGACATGGAAGTCACGTGGCATCAATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTTGTCAACGATTATTACTATGGCCGAGCCAGTGGTATGGCACCGCGTGCAAGGATTGCTGTTTATAAGGCTATCTATCCATCAGTGGGAACGCTTGCAGATGTTATTGCAGCTATCGATCACGCTATCCTGGATGGGGTGGATATCCTAACACTATCTATTGGACCAGATGATCCACCAGAAGGCACATTGACCTTCTTGAGTATATTTGACATTTGCTTGTTATATGCACAAAAGGCAGGAGTTTTAGTGGTGCAAGCTGCAGGGAATAAGGGTCCAGCGTCTTCGACCGTAGTGTCATACAGTCCCTGGACTATAGGTGTTGCAGCTTGCACTACAGGCAGAAGGTACCCTGCTTCTCTACTTCTTGGAAATGGCACTATAGTAGATGGAGTTGGACTATCAGGACCAAGTTTTGGAAATGGGACAATTTTGCAAAGGCTTGTATTAGCGAAGGATGCATTAAAAATAAATGGAACATTCCCAAGGACACCGGAGTACATAGAAGAGTGTCAACATCCAGAAGCTTTTGACCCTAATATAGTGTTTGCAAGTGTCATTATATGCACCTTCTCAGAGGGTTTCTATGATGGAACCTCAACTCTTGGTGCCATTGTCCACACATCAAAGGCTCTAGGATTCGCAGCTTATATTCTAGTTCCGAACCCAAGTTATGGAGATTATATTGCAGAGCCAATTCCTTTTGATTTTCCCGGTATTATGATCCCTCGTGTAGCTGATGCCAAGGTTATATTACAGCATTACGAAGATGAAACCAAGAGGGATGAGAAGGGAACTGCAACAGAATTTTGTGCTAGGGCAGCTGTAGGAGAAGGAAGAGTCGCCTCTTTCACAGGGCGGTCATCGGTAGTTAGTAGGTTTTCTTCAAGGGGTCCAGATATCATTGACATGAAAGGAAATCTTGCTGATATACTTAAACCTGATATTATTGCCCCAGGCCACCAAATATGGGGAGCATGGACCCCTATTAGTGCCTTACAACCTATGCTAACAGGGCACAATTTTGCATTACTATCTGGTACCAGCATGGCCGCACCTCATGTAGCTGGAATCGCAGCACTTATCAAGCAATATAATCCATTATGGACTCCATCTATGATAGCATCTGCAATCTCCACAACCGGCACAAAGCATGATAATCTTGGAGAGGTTTTGATGGCAGAAGGGTTTCAACCCAACAGCTTGTATCCATCTACTCCTCTTGAACACGGTGCAGGCATGGTGAACCCCAATGATGCCAATGATCCAGGCTTGGTACTATCATCAGGATATACAGATTACATTAGCTTCTTGTGCTCTTTGCCCAACATCAACCCGAATAAAGTAACTGCAGCAACTGGAGAACCTTGCAACACACACTTGTTTGCTGATCCACATAATCTAAACCTTCCTTCAGTAACAATATCAGCACTGAAAGGATCAGTTTCGGTGCGAAGAACTGTCATGAACATAGGGAACAATACAGAGACATATGTGGGCGCGGTTATACCACCAAATGGAACTAGAGTCAACTTGTATCCAACTTTGTTCACCGTAAGTCCACAAGAAACACAAGATCTAGAAATACAGATCAGTGCCACCCAATCAATGGAAAAGTTCAGCTTTGGTGAAATTGTTTTGACAGGAAGTTTAAATCACATTGTAAGAATAACATTGTCAGTGATACCAGTTTCAATATAA 2493 0.426 MHMSTSMAQKKATFIALVTSFSLFIFIFISIFFDYIACLEEDRSIYLVLLEGDGVAFHQDSPRVYPNSGASIAHARRLLEESHDLLLQTTLDTGTYTKLHSFKHHINGFAVYTTPSQVARLRVMKGVKMVEKDRGAKMMTTYTPELLSLRKGIWAQEGGEINAGEGVVIGFVDSGINPLHPSFAYDPMHTFTSNLSHFVPTCETGPHFPLSSCNGKIVSARYFSAGAEATATLNASLDFLSPFDADGHGSHVASIAAGNAGVPVVVNDYYYGRASGMAPRARIAVYKAIYPSVGTLADVIAAIDHAILDGVDILTLSIGPDDPPEGTLTFLSIFDICLLYAQKAGVLVVQAAGNKGPASSTVVSYSPWTIGVAACTTGRRYPASLLLGNGTIVDGVGLSGPSFGNGTILQRLVLAKDALKINGTFPRTPEYIEECQHPEAFDPNIVFASVIICTFSEGFYDGTSTLGAIVHTSKALGFAAYILVPNPSYGDYIAEPIPFDFPGIMIPRVADAKVILQHYEDETKRDEKGTATEFCARAAVGEGRVASFTGRSSVVSRFSSRGPDIIDMKGNLADILKPDIIAPGHQIWGAWTPISALQPMLTGHNFALLSGTSMAAPHVAGIAALIKQYNPLWTPSMIASAISTTGTKHDNLGEVLMAEGFQPNSLYPSTPLEHGAGMVNPNDANDPGLVLSSGYTDYISFLCSLPNINPNKVTAATGEPCNTHLFADPHNLNLPSVTISALKGSVSVRRTVMNIGNNTETYVGAVIPPNGTRVNLYPTLFTVSPQETQDLEIQISATQSMEKFSFGEIVLTGSLNHIVRITLSVIPVSI* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0003 830 ProSitePatterns Serine proteases, subtilase family, histidine active site. 248 258 IPR022398 -
Lan1g0003 830 Gene3D - 378 541 - -
Lan1g0003 830 Gene3D - 702 827 - -
Lan1g0003 830 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 69 821 IPR045051 -
Lan1g0003 830 Pfam Subtilase family 164 649 IPR000209 GO:0006508|GO:0008236
Lan1g0003 830 Gene3D Peptidase S8/S53 domain 166 698 IPR036852 GO:0004252|GO:0006508
Lan1g0003 830 CDD PA_subtilisin_like 384 517 - -
Lan1g0003 830 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 37 138 IPR037045 -
Lan1g0003 830 ProSitePatterns Serine proteases, subtilase family, serine active site. 611 621 IPR023828 -
Lan1g0003 830 Pfam Fibronectin type-III domain 731 825 IPR041469 -
Lan1g0003 830 ProSiteProfiles Serine proteases, subtilase domain profile. 143 685 - -
Lan1g0003 830 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 169 180 IPR023827 -
Lan1g0003 830 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 69 821 - -
Lan1g0003 830 PRINTS Subtilisin serine protease family (S8) signature 164 183 IPR015500 -
Lan1g0003 830 PRINTS Subtilisin serine protease family (S8) signature 244 257 IPR015500 -
Lan1g0003 830 PRINTS Subtilisin serine protease family (S8) signature 610 626 IPR015500 -
Lan1g0003 830 SUPERFAMILY Subtilisin-like 139 689 IPR036852 GO:0004252|GO:0006508
Lan1g0003 830 CDD Peptidases_S8_3 137 645 IPR034197 -
Lan1g0003 830 Pfam Peptidase inhibitor I9 75 134 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0003 Lan-Chr1 12168 16947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0003 23 825 Subtilisin-like Serine Gene Family AT1G62340 58.659 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0003 - - gmx:100798915 1191.79