Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1105 ATGGCTTTGATCTTGCATGCGGCATCAACAAACAAAAACACTTACAAGGCTCTGATTGCAGCAGAGTACAATGGTGTCCAAGTTCAATTGGCCCCTAATTTTGAGATGGGTGTCTCTAATAAAACCCCTGAATTTCTCAAGTTGAACCCTCTCGGGAAGGTACCTGTGTTGGAAACTCCGGATGGTCCTGTTTTTGAAAGCAATGCCATCGCACGTTATGTTGCACGATTGAAGGGTGACTCCTCTTTGCTTGGATCTTCTCTCATTGACCAGGCTCATGTTGATCAATGGATCGATTTTTCATCACTGGAAATTGATGCTAATATCTTGAAAGTGTTGCTTCCAAGAGTTGGATTTGCCCCATATCTTGCTCCAGTTGAGGAGGCTGCAAATGCTGCACTGAAGAGAGCTCTGGGTGCACTGAACACTCACCTTGCTTCCAGTACTTACCTGGTTGGACACACCGTGACCCTTGCTGACATTATAACAACACTCAATCTGTATTTAGGGTTCACTAAGGTCTTAGTTAAGAGTTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACTTTGGTCAACCAGCCAAATTTCCGAAAGGTATTAGGCCAGGTTAAGCAGACTGAAGCTATTATACCTATTCCATCTGCAAAGAAGCCTGTCAAGGAAACCAAACCCAAAGCTAAGGAGCAACCAAAGAAAGAGGCTAAACCAGAGCCAGAGAAGCCTGCTGAGTTGGCAGAAGAGGAGGCACCCAAGCCCAAAGCCAAGAATCCTCTTGATCTTCTTCCTCCGAGCAAGTTGATATTGGATGAGTGGAAGAGGCTGTACTCAAACACTAAGACTAACTTCCGCGAGGTTGCAATCAAAGGATTCTGGGACATGTACGACCCTGAAGGATATTCTTTATGGTTCTGTGATTACAAATACCAGGATGAGAACACTGTTTCCTTTGTGACATTGAACAAAGTTGGTGGATTTCTTCAGAGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGATGCTTGTAATTGGATCGCAGCCACCATTTAAGGTGAAGGGTTTGTGGCTTTTCCGTGGCCAAGAAATTCCACAATTTGTGATTGATGAATGCTATGACATGGAGCTCTATGAGTGGACAAAGGTTGACCTTTCTGATGAAGCCCAGAAGGAACGTGTTAATCAGATGATTGAAGATTATGAGCCTTTTGAGGGAGAGCCTCTTTTGGATGCCAAGTGCTTTAAGTGA 1254 0.4418 MALILHAASTNKNTYKALIAAEYNGVQVQLAPNFEMGVSNKTPEFLKLNPLGKVPVLETPDGPVFESNAIARYVARLKGDSSLLGSSLIDQAHVDQWIDFSSLEIDANILKVLLPRVGFAPYLAPVEEAANAALKRALGALNTHLASSTYLVGHTVTLADIITTLNLYLGFTKVLVKSFTSEFPHVERYFWTLVNQPNFRKVLGQVKQTEAIIPIPSAKKPVKETKPKAKEQPKKEAKPEPEKPAELAEEEAPKPKAKNPLDLLPPSKLILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYQDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSQPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDLSDEAQKERVNQMIEDYEPFEGEPLLDAKCFK* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1105 417 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 222 IPR010987 -
Lan19g1105 417 CDD GST_N_EF1Bgamma 5 77 - -
Lan19g1105 417 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Lan19g1105 417 Pfam Glutathione S-transferase, C-terminal domain 124 197 IPR004046 -
Lan19g1105 417 SFLD Main (cytGST) 5 190 - -
Lan19g1105 417 SUPERFAMILY eEF1-gamma domain 258 417 IPR036433 GO:0003746|GO:0006414
Lan19g1105 417 PANTHER - 1 417 - -
Lan19g1105 417 CDD GST_C_EF1Bgamma_like 90 210 - -
Lan19g1105 417 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 257 417 IPR001662 GO:0003746|GO:0006414
Lan19g1105 417 SMART EF1G_2 256 364 IPR001662 GO:0003746|GO:0006414
Lan19g1105 417 SUPERFAMILY GST C-terminal domain-like 73 211 IPR036282 -
Lan19g1105 417 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 257 417 IPR036433 GO:0003746|GO:0006414
Lan19g1105 417 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Lan19g1105 417 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 417 IPR044628 GO:0004364
Lan19g1105 417 MobiDBLite consensus disorder prediction 220 261 - -
Lan19g1105 417 Gene3D Glutaredoxin 1 74 - -
Lan19g1105 417 SFLD Glutathione Transferase (cytosolic) 5 190 IPR040079 -
Lan19g1105 417 Gene3D - 80 214 - -
Lan19g1105 417 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Lan19g1105 417 Pfam Elongation factor 1 gamma, conserved domain 256 364 IPR001662 GO:0003746|GO:0006414
Lan19g1105 417 MobiDBLite consensus disorder prediction 221 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1105 Lan-Chr19 18109109 18111660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1105 1 417 Eukaryotic Initiation Factors Gene Family AT1G57720 74.341 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1105 K03233 - gmx:100795680 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1105 19 18109109 18111660 Lan19g1105 19 18109109 18111660 ECH