Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1100 ATGGTCCCTTTGACATGCATTGTTTTCATTTTCACTCTGTTTTCCTCTGTTTTTTCTTCATCCTTGCTTAGTGATTTCAATGTCTTAGTCTCACTTAAACAAGGATTCCAATTCCCAAACCCAGTTATAAACACTTGGGACATTTCCAATTTCAGCTCTGTTTGTTCATGGTCTGGAATTCAATGCCGTCTCGGTCGAGTTTCGTCGCTGGACTTAACAGATTTGAATCTATATGGCTCTGTTTCCCCTGAAATTTCAAAACTTGTAAAGCTCACTCACCTTTCCCTTGCAGGAAACAACTTCACTGACACCATTCACATCAACAACATTACCAACCTTCAATTTCTCAACATCTCCAACAACCAATTCATTGGCACCATTGATTGGAACTACTCCACCATGGAAAACTTGCAAGTTCTTGATGCCTATAACAATAACTTCACTTCCTTGCTTCCTATAAGGGTTTTGAGTTTGAAGAGGCTTAAGTACTTGGATCTTGGTGGCAACTACTTTTATGGTGAAATCCCAAGAAGCTATGGAAATTTAGTTGGGCTGGAATATCTTTCTCTAGCAGGCAATGATCTTCATGGAAAAATCCCTGTTCAGTTGGGGAATCTCACTAAGTTGAAGGAGATATATTTGGGGTATTACAACTCTTATGAAGGTGGAATTCCTATGGAACTTGGAAAGTTGATAAATCTTGTTCACATGGATCTATCAAGCTGTGATTTGAATGGTACAATTCCAAGAGAGTTAGGAAACTTGAAAGAGCTTGATACACTTTACTTGCATATCAATCAGCTTTCTGGTTCAATACCAAAAGAGCTTGGAAACTTGACTAAAATAGTGAACCTTGATCTTTCAAGAAATGAACTCAGTGGAGAAATCCCTATTGAGTTCATCAACCTCAAGCAACTCAAGCTTTTCAATCTTTTCTTGAACAAGTTACACGGCTCCATACCTGACTACATTGCAGACTTACCGGACTTGGAGACACTCGGGCTGTGGATGAACAACTTCACAGGCGAAATCCCACGCAACCTCGGCCTAACCGGGAAGCTGCAGCTACTTGATTTGTCCTCAAATAAACTCACTGGTGTAATACCACCTTACCTATGTTCCTCAAATCAGCTAAGGATTTTGATTCTCCTTAACAATTTCCTCTTTGGTCCCATACCTCAAGGTCTAGGAACATGTTACAGTCTCATTAGAGTAAGGTTAGGACAGAATTACCTTAATGGTAGCATTCCAAATAGTTTTCTTTACCTTCCTAAGATTAACTTAGTTGAATTACAAAACAACTATTTGTCAGGAAGTTTATCAGAGAATGGTAATAGTTCCTCCCAGCCTGCTAATTTATGGCAACTTGATTTGTCAAACAATGCCTTGTCTGGCCCTTTACCACATTCACTCTCAAATTTCTCTTCCATTCAGAACCTTTATCTTAGTGGAAACCAGTTTTCAGGTCCAATTCCATCTTCAGTTGGAGGACTAAATCAAGTACAAAAGCTTGATCTTAGTAGAAACTCCTTATCTGGAGAAATTCCACCTCAAATTGGGTACTGTGTCCATCTAACTTTCCTTGACATGAGCCAGAACAATCTCTCTGGCTCCATTCCACCAATGATTTCCAATATCCACATTCTAAACTACTTGAACTTATCAAGAAACCATTTGAACCAAACCATCCCAAAGTCAATTGGGACTATGAAAAGCCTCACCATTGCTGATTTCTCCTTCAATGAATTTTCTGGCAAATTACCTGAATCGGGCCAATTTGCTTTCTTCAATGCCTCATCTTTCGCGGGTAATCCTCAACTTTGCGGTTCGCTCTTGAACAACCCTTGCAACTTGACCACAATCACATCACATCCGGGAAAAGGCCATGCAGATTTTAAGCTATTATTTGCACTTGCTCTATTGATATGTTCCCTGGTATTTGCCATGGCAGCCATAATAAAAGCCAAGTCCTTCAAAAAGAATGGAGCTGGTTCGTGGAAGATGACCGCGTTCCAGAAGCTGGAATTCACAATTTCTGACATTCTTGAATGTGTCAAAGATGGCAATGTAATCGGAAGAGGTGGTGCTGGGATTGTTTACCATGGAAAAATGCCAAACGGGGTCGAAGTCGCAGTTAAAAAACTACTCGGTTTCGATGCAAATAGCCATGATCATGGCTTCAGGGCTGAAATTCAAACACTAGGGAACATAAGGCATAGAAACATAGTGAGGTTACTTGCATTCTGTTCCAACAAAGAGACTAATCTTCTTGTGTATGAGTACATGAGGAATGGTAGCTTAGGTGAGGCATTACATGGTAAAAAAGGTGCATTCTTGGTTTGGAATTTGAGGTACAAAATTGCTATTGATTCAGCTAAAGGCCTTTGCTACCTTCACCATGATTGTTCACCATTGATTGTTCATAGAGATGTGAAATCCAACAACATTTTGTTGAATTCCAATTTTGAAGCACATGTAGCTGATTTTGGACTTGCAAAGTTCTTGGTAGATGGTGGTGCATCTGAGTATATGTCTTCAATTGCAGGCTCATATGGTTACATTGCACCTGAGTATGCTTATACATTGAGAGTGGATGAAAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTATTAGAGCTTGTAACAGGGAAGAAACCAGTGGGAGATTTTGGAGAAGGAGTAGATCTTGTTCAATGGTGCAAGAAAACAACAAATGGACGGAAAGAAGAGATAGTGAAGATAGTTGATATAAGACTAAAGGTGGTACCAAAAGAAGAAGTTATGCACATGTTTTTCATAGCAATGTTATGCTTAGAAGAAAATAGTGTGGTTAGACCCACCATGAGGGAAGTGGTTCAAATGCTCTCTGAATTCCCTCACCCTTCTTCTTCTTCTTCTTCTTCTTCCTCTAATCATCCACCAACCCATAAATTTCACAAACAAAAACCTTCTCCTCCCACTTTTAAACAAGATCTTTTGGTTTAG 2985 0.395 MVPLTCIVFIFTLFSSVFSSSLLSDFNVLVSLKQGFQFPNPVINTWDISNFSSVCSWSGIQCRLGRVSSLDLTDLNLYGSVSPEISKLVKLTHLSLAGNNFTDTIHINNITNLQFLNISNNQFIGTIDWNYSTMENLQVLDAYNNNFTSLLPIRVLSLKRLKYLDLGGNYFYGEIPRSYGNLVGLEYLSLAGNDLHGKIPVQLGNLTKLKEIYLGYYNSYEGGIPMELGKLINLVHMDLSSCDLNGTIPRELGNLKELDTLYLHINQLSGSIPKELGNLTKIVNLDLSRNELSGEIPIEFINLKQLKLFNLFLNKLHGSIPDYIADLPDLETLGLWMNNFTGEIPRNLGLTGKLQLLDLSSNKLTGVIPPYLCSSNQLRILILLNNFLFGPIPQGLGTCYSLIRVRLGQNYLNGSIPNSFLYLPKINLVELQNNYLSGSLSENGNSSSQPANLWQLDLSNNALSGPLPHSLSNFSSIQNLYLSGNQFSGPIPSSVGGLNQVQKLDLSRNSLSGEIPPQIGYCVHLTFLDMSQNNLSGSIPPMISNIHILNYLNLSRNHLNQTIPKSIGTMKSLTIADFSFNEFSGKLPESGQFAFFNASSFAGNPQLCGSLLNNPCNLTTITSHPGKGHADFKLLFALALLICSLVFAMAAIIKAKSFKKNGAGSWKMTAFQKLEFTISDILECVKDGNVIGRGGAGIVYHGKMPNGVEVAVKKLLGFDANSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLVWNLRYKIAIDSAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFLVDGGASEYMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELVTGKKPVGDFGEGVDLVQWCKKTTNGRKEEIVKIVDIRLKVVPKEEVMHMFFIAMLCLEENSVVRPTMREVVQMLSEFPHPSSSSSSSSSNHPPTHKFHKQKPSPPTFKQDLLV* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1100 994 Gene3D Ribonuclease Inhibitor 131 212 IPR032675 -
Lan19g1100 994 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Lan19g1100 994 PANTHER UNNAMED PRODUCT 7 964 - -
Lan19g1100 994 MobiDBLite consensus disorder prediction 959 974 - -
Lan19g1100 994 ProSiteProfiles Leucine-rich repeat profile. 136 157 IPR001611 GO:0005515
Lan19g1100 994 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Lan19g1100 994 Pfam Protein tyrosine and serine/threonine kinase 688 955 IPR001245 GO:0004672|GO:0006468
Lan19g1100 994 SUPERFAMILY L domain-like 352 609 - -
Lan19g1100 994 MobiDBLite consensus disorder prediction 959 994 - -
Lan19g1100 994 ProSiteProfiles Protein kinase domain profile. 685 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1100 994 SMART serkin_6 685 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1100 994 Pfam Leucine Rich Repeat 353 373 IPR001611 GO:0005515
Lan19g1100 994 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 7 964 - -
Lan19g1100 994 Gene3D Ribonuclease Inhibitor 24 130 IPR032675 -
Lan19g1100 994 SMART LRR_typ_2 134 158 IPR003591 -
Lan19g1100 994 SMART LRR_typ_2 182 206 IPR003591 -
Lan19g1100 994 SMART LRR_typ_2 88 113 IPR003591 -
Lan19g1100 994 SMART LRR_typ_2 255 279 IPR003591 -
Lan19g1100 994 SMART LRR_typ_2 351 375 IPR003591 -
Lan19g1100 994 SMART LRR_typ_2 546 570 IPR003591 -
Lan19g1100 994 SMART LRR_typ_2 498 522 IPR003591 -
Lan19g1100 994 SUPERFAMILY Protein kinase-like (PK-like) 676 955 IPR011009 -
Lan19g1100 994 PRINTS Leucine-rich repeat signature 354 367 - -
Lan19g1100 994 PRINTS Leucine-rich repeat signature 498 511 - -
Lan19g1100 994 Gene3D Ribonuclease Inhibitor 372 616 IPR032675 -
Lan19g1100 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Lan19g1100 994 Gene3D Transferase(Phosphotransferase) domain 1 762 978 - -
Lan19g1100 994 SUPERFAMILY RNI-like 69 389 - -
Lan19g1100 994 Gene3D Ribonuclease Inhibitor 213 371 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1100 Lan-Chr19 18079108 18084388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1100 14 986 Receptor kinase-like Gene Family AT5G65700 56.754 0.0 1075
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan19g1100 PK_Tyr_Ser-Thr 9.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1100 - - rcu:8263279 1489.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1100 19 18079108 18084388 Lan19g1100 19 18079108 18084388 ECH