Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1095 ATGGTTGAGTTTGATTATGAAGAGATTGTAAAAGCAACAGATAACTTCAACCCAAGAATGCTAATTGGCAAAGGAAGCCATGGATTGGTATATAAAGGTGTTATACTATTAAAACATAACAACACTTCATTGGTTGCTATAAAGAAGCCATCATCTCATAAAGGCCTTGAATCACTTCATGAAGAAAACTCCAATAAGCTCCAAAACGAGATTCAAGTTTTATCCTCTCTAAATGATGAAAACCCTCATGTAGTTAAACTCATAGGAACAAGTTATGACTCATTCAACAACAACAACAAGGTCATTGTCATTGAGTTTATGCCTAATGGCTCTCTCCATGATTGGCTTCACGATACAAAACCTAACCTTCCCACATGGCCTAAACGAGTTGAAATCGCCATGCAAATCACTCGTGCGGTGCAGTTTCTTCATGAAGGTAAGCCCTTGGTCATTCATAGAGATATCAAGTCTTGTAACATATTGTTTGATTCTCAATGGAATGTTAAGTTAGCAGATTTTGGATTAGCAATCATAGGTGGTGGAGTCCAGGCACTGACTCAACCTGCTGGGACAATAGGATATTTGGACCCTTGTTACACCACACCTACTAAACTCAGCACCAAAAATGACATGTTCAGCTTTGGGGTTGTATTATTAGAGATCATTAGTGGTAGAAAGGCCATTGATATGTGCAACACACCAGCTTCACTAGTGGAATGGGCCATTCCATTAATAGAACAACAACATTGGTTACAAATATGTGACACAAGAATTAAGGTAATGCCTAATTACATGGTTAGCACCATCATTCATTTTCTACGTGTGGCTGCATGTTGTGTGTCACCAAATGAAGATGAACGTCCATCAGCAAGGGAAGTGATTACAGGAATGGAAGATTGTTTCATTGAACAAGTGAGGTTTCCCATTTGGGCAAGTGTTTTGAAGAAGATGGTGAGGTTTAGAAAGAGGAAGAAGGTGATAAAGAATATAGTTAGTAAGAGTAAAACACAAGTAGAATGTGAATGTAAAGTAGAAGAAGATGGTGAAGAGGTTGATAGTGATACTTATATTTCAACTGAGAAGGTAGCCATAACATTCAACCACCTTTTGGCAGATGTTACATTCAATTTGGGAAAGTAA 1140 0.3789 MVEFDYEEIVKATDNFNPRMLIGKGSHGLVYKGVILLKHNNTSLVAIKKPSSHKGLESLHEENSNKLQNEIQVLSSLNDENPHVVKLIGTSYDSFNNNNKVIVIEFMPNGSLHDWLHDTKPNLPTWPKRVEIAMQITRAVQFLHEGKPLVIHRDIKSCNILFDSQWNVKLADFGLAIIGGGVQALTQPAGTIGYLDPCYTTPTKLSTKNDMFSFGVVLLEIISGRKAIDMCNTPASLVEWAIPLIEQQHWLQICDTRIKVMPNYMVSTIIHFLRVAACCVSPNEDERPSAREVITGMEDCFIEQVRFPIWASVLKKMVRFRKRKKVIKNIVSKSKTQVECECKVEEDGEEVDSDTYISTEKVAITFNHLLADVTFNLGK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1095 379 Gene3D Transferase(Phosphotransferase) domain 1 107 306 - -
Lan19g1095 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Lan19g1095 379 Gene3D Phosphorylase Kinase; domain 1 1 106 - -
Lan19g1095 379 Pfam Protein kinase domain 20 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1095 379 SMART serkin_6 16 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1095 379 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Lan19g1095 379 ProSiteProfiles Protein kinase domain profile. 16 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1095 379 PANTHER - 1 334 - -
Lan19g1095 379 SUPERFAMILY Protein kinase-like (PK-like) 3 294 IPR011009 -
Lan19g1095 379 PANTHER OS01G0750732 PROTEIN 1 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1095 Lan-Chr19 18060891 18062317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1095 4 308 Receptor kinase-like Gene Family AT3G59420 40.064 5.37e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan19g1095 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1095 - - lang:109334080 736.487