Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1094 ATGGAACTATCAGATTTACAAAACAACAAGAACAACAACAAGAACAGCAAGAAGAAGAAGAAGAATGAAAATATTGATGAGAACCCACCTTCTCAACCTCAAGTGGGTCCTATTCATATCATGGGCTCCATCAACCATCCTTCTAATTCTTCTTCTTCAAATTCTTCTTCTTCTCCTTCAACAACAACAACAACAACAACAACAACAACAACAATCCCTCATCAACTACCCAGATCTGAACCCCAACTATCCATCTCCACCATCCCCAAACGATCCACCAAGGACAGGCACACCAAGGTAGATGGTCGAGGCCGCAGAATTCGAATGCCAGCCACCTGTGCCGCTAGGGTTTTCCAATTGACACGAGAATTGGGACACAAGTCCGATGGCGAGACCATCGAGTGGCTCCTACAACAGGCTGAGCCCGCCATCATCGCCGCCACTGGTACTGGAACTATCCCTGCTAATTTCTCCACCCTCAACTTGTCCATTCGCACCACCGGGACCACGCTCTCCGCTCCGGCCTCTAAATCGGCACCGCACGCGTTTCATGGAGCCTTGGCACTCGCTCACCACCACCCTTATGAGGAAGCGTTCCACCACACACCGATGTTAGGGTTTCAGCATCATAGCCTATTAACCGGTGAGCCAATTCTTGGTACCAGTGCTGGTGAGTCCAGCGACAACTATATGAGGAAACGGTTCAGAGAAGATTTGTTTAAAGATGATAGTAACAATTCGCAAAATGAAAATGATCACGATGGTAATGCTTCTTCACCCAAACATTTCAAAACAAACATATCCCAACAACAACAACAACACCAACAAGGTGGTGTAGTTTCTTCTCTTCGACCTTCTAATATGTTACCTGCAACTGCCATGTGGGCGGTGGCGGCTCCACCCACAACCACCACAACTCCTCCTCCTCCTCCTCCTGGTAGTACTATTTGGATGCTTCCTGTTGCTGGTGGCACTACTTCTGTCACTGCTGCTCCTTCTTCAGATACACATCAGATGTGGCCTTTTACCGCCTCAGGTAGCGGCGGTGGTGGTGTTGGTGGTGTGAATCCAGTGCATTTTATGCCAAGGTTTAATCTTCAAGGTGGAGGGGTTGAATTCCAAGGTGGAGGACGTGGTGGTGGTGGAGGAGGGGGTGCCCTACAATTGGGTTCCATGTTAATGCAGCAACAGCAACAGCCATCTCAGCATCTTGGGTTGGCTATGTCTGAATCAAACTTGGGTATGTTAGCTGCTCTCAATGCTTATGCTAGAGCTGGTGCTGCTTTGAACATTAATTCTGATCACCAAAGTCATAATCATCATCATCACATGGAGCAGCAGCAGCAGCAGCATCACCATCAACACCAACACCATCATCAATCTCATGAACCTGCTGATAGTGGAGAAGATGGTGGTCCTGATAGCTCTCATTGA 1434 0.4798 MELSDLQNNKNNNKNSKKKKKNENIDENPPSQPQVGPIHIMGSINHPSNSSSSNSSSSPSTTTTTTTTTTTIPHQLPRSEPQLSISTIPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNLSIRTTGTTLSAPASKSAPHAFHGALALAHHHPYEEAFHHTPMLGFQHHSLLTGEPILGTSAGESSDNYMRKRFREDLFKDDSNNSQNENDHDGNASSPKHFKTNISQQQQQHQQGGVVSSLRPSNMLPATAMWAVAAPPTTTTTPPPPPPGSTIWMLPVAGGTTSVTAAPSSDTHQMWPFTASGSGGGGVGGVNPVHFMPRFNLQGGGVEFQGGGRGGGGGGGALQLGSMLMQQQQQPSQHLGLAMSESNLGMLAALNAYARAGAALNINSDHQSHNHHHHMEQQQQQHHHQHQHHHQSHEPADSGEDGGPDSSH* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1094 477 MobiDBLite consensus disorder prediction 260 284 - -
Lan19g1094 477 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 52 455 IPR005333 GO:0003700
Lan19g1094 477 Coils Coil 3 23 - -
Lan19g1094 477 MobiDBLite consensus disorder prediction 240 259 - -
Lan19g1094 477 MobiDBLite consensus disorder prediction 434 477 - -
Lan19g1094 477 MobiDBLite consensus disorder prediction 43 89 - -
Lan19g1094 477 MobiDBLite consensus disorder prediction 1 101 - -
Lan19g1094 477 Pfam TCP family transcription factor 92 247 IPR017887 -
Lan19g1094 477 PANTHER TRANSCRIPTION FACTOR TCP8 52 455 - -
Lan19g1094 477 MobiDBLite consensus disorder prediction 240 284 - -
Lan19g1094 477 ProSiteProfiles TCP domain profile. 93 147 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1094 Lan-Chr19 18052730 18054716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1094 90 412 TCP Transcription Factor Family AT1G35560 44.073 1.12e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan19g1094 TCP 8.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1094 - - adu:107482753 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1094 19 18052730 18054716 Lan19g1094 19 18052730 18054716 ECH