Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1082 ATGATGATGAAGGTTTTTCATGTTATGATGTTTCCTTTGTTTTATGCACTGTTTCTATCTATGACTATGAGTTCAGTATATTCAGCACCACCTAATCATTCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACATGTCCTATGGACCTTAACTATGTGTTAAGAATTCCATGGAACTCTTCTGTGTGCCAAAATTTTCATCCTTTGGTGTCAAAAAATGACACACACTCAAGCTCTTGTTGTCAAACTTTGTTGTCCCTTTTTGGTATAGCACTTTCTCAACACCTCAAAGAAACTTCTCATTTCAACTTACCTGATGTTTCTACCTCTAGCTTATGCCTTCAAGATTTTCAATCCATGCTCACTTCACTTTCACTCCCTAATACCCTTGTTAATTCTTGCTTTGACCCTCTTCAGTTTGTTATATCCCCTAATGTTTGTGCAAGTATTGAAACTGTTCCAGATTGGATCAGCAAGGTTGGTAACAACAAAGCACTTGAATCTGGATGTAAACCAGACCTTACTGATCTTTCTTTATGTGATGTGTGCCTCTCTGCAGGATTACAGGTCAAGCAGGAATTGATTTCAATTGATGGCAATGCTTCTCATTCTATAGATTGCTTTTACTTCACCATTCTTTATGCTGCTGGATTTGTGAATGAGTTTGGACCTGAAAGCAATGGTGCTGTGACTTGCATTTTTGGTTTGTCTGTTTATTCACAAATTGGTTCTGGTGGAAAGGGTCATCAGACTCTAGTGTTTGGTTTAACAGGAGCTGGAGTTGCATTGTTAGTAATGTGTTGCTTGTTGGGTGTGTATGTTTGGTATGATAGGAAGTATAAGAGGAAGAAGCTTGGAAGTTTTAAATATGATTTGGACCCTGAGGAACAAGGCTCTAGGCCTAGAATGAGGCCTAATACAGGGTCAATTTGGTTCAAAATTGAGGAACTTCAGAAGGCTACTGATAAATTTTCAAACAAGAACTTCATAGGGCGAGGTGGGTTTGGATTGGTTTTCAAGGGAACATTGGCTGATGGAACCGTTGTTGCGGTGAAAAGGATTTTGGAATCTGATTTTCAAGGGGATGCTGAGTTTTGTAATGAGGTGGAGATTATTAGCAATCTGAAGCACCGTAATCTAGTGCCGCTTAGAGGCTGTTGTGTGGTTGATGAGAATGAAAATCCTGATGAGAGTGGAAGCCAAAGGTATCTTGTTTACGATTACATGCCGAACGGTAACTTGGAAGACCATCTCTTTGTATCTACAGACCCTCAAAAAGCGAATAAGTCATTGACTTGGCCTCAAAGAAAAGCCATAATCTTGGATGTGGCAAAGGGGTTGGCCTATTTGCACTATGGAATTAAGCCTGCAATTTTTCATAGGGATATCAAAGCTACCAATATACTACTTGATGCAGAAATGAGGGCAAGGGTTGCAGATTTCGGTCTTGCTAAACAAAGCAGGGAGGGTCAGTCTCATCTCACTACTAGAGTAGCCGGTACGCATGGATATCTAGCACCAGAATATGCACTCTATGGTCAACTAACCGAGAAAAGCGATGTCTATAGCTTCGGCGTGGTTGTTTTGGAGATAATGTGTGGGAGGAAAGCTCTTGATTTGTCCTCAACAGGTTTGTCGCGGGCATTCTTGATAACCGATTGGGCTTGGTCATTGGTGAAATCAGGGAACATAGAAGAGGCTTTGGATAGTTCATTGTTAGAAGATGGAGACCATCCTAGTTCAAATCCTAAGAGCATAATGGAAAGGTTTTTGTTGGTTGGAATTCTATGTTCTCATGTTATGGTTGCTTTGAGGCCAACAATTTCTGATGCTTTGAAAATGCTTGAAGGCGATATCGAGGTTCCAACAATCCCGGATCGGCCTATGCCTCTCGGGCACCCTTCATTTTATGCTAATGATTGCAATACTTTTAGCATTTCCCCTGCATTAAGTGGTCCAAAATTGCAAGCTATAGACATGCTCAGGTAA 1998 0.4054 MMMKVFHVMMFPLFYALFLSMTMSSVYSAPPNHSPSSSSSSSSSSSSTCPMDLNYVLRIPWNSSVCQNFHPLVSKNDTHSSSCCQTLLSLFGIALSQHLKETSHFNLPDVSTSSLCLQDFQSMLTSLSLPNTLVNSCFDPLQFVISPNVCASIETVPDWISKVGNNKALESGCKPDLTDLSLCDVCLSAGLQVKQELISIDGNASHSIDCFYFTILYAAGFVNEFGPESNGAVTCIFGLSVYSQIGSGGKGHQTLVFGLTGAGVALLVMCCLLGVYVWYDRKYKRKKLGSFKYDLDPEEQGSRPRMRPNTGSIWFKIEELQKATDKFSNKNFIGRGGFGLVFKGTLADGTVVAVKRILESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDENENPDESGSQRYLVYDYMPNGNLEDHLFVSTDPQKANKSLTWPQRKAIILDVAKGLAYLHYGIKPAIFHRDIKATNILLDAEMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSTGLSRAFLITDWAWSLVKSGNIEEALDSSLLEDGDHPSSNPKSIMERFLLVGILCSHVMVALRPTISDALKMLEGDIEVPTIPDRPMPLGHPSFYANDCNTFSISPALSGPKLQAIDMLR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1082 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Lan19g1082 665 Pfam Protein kinase domain 328 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1082 665 Gene3D Phosphorylase Kinase; domain 1 297 411 - -
Lan19g1082 665 ProSiteProfiles Protein kinase domain profile. 327 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1082 665 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 42 662 - -
Lan19g1082 665 Gene3D Transferase(Phosphotransferase) domain 1 412 625 - -
Lan19g1082 665 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Lan19g1082 665 CDD STKc_IRAK 333 620 - -
Lan19g1082 665 Pfam SPARK 44 211 IPR043891 -
Lan19g1082 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 662 - -
Lan19g1082 665 SUPERFAMILY Protein kinase-like (PK-like) 303 619 IPR011009 -
Lan19g1082 665 SMART serkin_6 327 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1082 Lan-Chr19 17963534 17966446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1082 42 665 Receptor kinase-like Gene Family AT1G11050 63.040 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lan19g1082 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1082 - - gmx:100806560 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1082 19 17963534 17966446 Lan19g1082 19 17963534 17966446 ECH
Lan19g1082 19 17963534 17966446 Lan16g0023 16 115647 118239 LSH
Lan19g1082 19 17963534 17966446 Lan12g0571 12 12470656 12472607 PCT