Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1063 ATGAAAAGTATATACAATGTATTCAATGGTTTGAAACCAGTGATGCTAATGGTGATGGTGCAGATTGCATTCACTGCAGTCAATGTTCTCTACAAGCTTGCCATAAACGATGGAATGAGTGTGAGAGTAGCTACTGCTTATAGACTAGCTTTTGGATCAGCTTTTACTGTTCCTCTTGCTCTCATTTCTGAAAGGAAGAACAGACCCAAGATGACTTGGAGGGTGCTTTTCATGGCATTTTTTTGTGGCTTGTTTGGGGCAAGCTTATTTCAAAACCTTTTCTATGGGGCTCTGGCTTTGACATCAGCAACATTTGTGTCTGCTATATACAACCTTGTTCCAGCCATCACCTTTATTTTGGCCATATCCTGTGGTTTGGAAAAATTGAATTTGAGAGCAGCAGCAGGAAGGGCCAAAGTGTTAGGAACTCTAATAGGAATTGGAGGGGCAATGTTTTTGACATTTTACAAAGGAATAAAAATTTATATTTGGCCTTTCCACATCAATCTTTTGCATTCAAATGGCCACATGATACCATTACATGCTGACTCTAGTAATAAGTTGGTGGGTGTTTTATGTGCCATAGCAAGTTGCTTCTCTTATGCTTTGTGGCTTATCATTCAGGCTAAGATGAGCAAAGAATATTCAAGCCATTATTCAAGTACAGCTTTGATGATTACAGCAGGGGCAATACAAGCCACCATTTATGGTCTTTGTGTTGAGAGGGATTGGAGCCAATGGAAGTTGGGTTGGAATATTAGGCTATTAACTGTAGCTTATTCGGGAATCGTGGGTTCTGGATTAGTGTTTATTGTGATTGCATGGTGCATACATATGAGAGGGCCTCTATTTGCTTCTGTTTTCAACCCTCTAATGCTCGTGCTTGTTGCTGTTGCAGCTTCTTTGATGTTGAATGAGAACTTATATTTAGGAAGTGTGGTTGGAGCAGTGATGATTGTGTGTGGACTATACATGGTGCTTTGGGGTAAGAGAAAAGAAATGAAAAATATGACTCAGTTAGTGCCATCAGAAATCATCAAAAAAACTGAAGTTATTGAAGTTGTTGTTCGATCCACTCCAATTATAAATAATGATAAATATGATTACAACAATCACAACCAAACAAATTCTATTAAGAATGTTTACAAAGATCTGGATTATATGCCACGAAATGAAGAAAAATATGATATTCACAATAAGGAGATAAATGAAGTAATCTCCTAA 1224 0.3775 MKSIYNVFNGLKPVMLMVMVQIAFTAVNVLYKLAINDGMSVRVATAYRLAFGSAFTVPLALISERKNRPKMTWRVLFMAFFCGLFGASLFQNLFYGALALTSATFVSAIYNLVPAITFILAISCGLEKLNLRAAAGRAKVLGTLIGIGGAMFLTFYKGIKIYIWPFHINLLHSNGHMIPLHADSSNKLVGVLCAIASCFSYALWLIIQAKMSKEYSSHYSSTALMITAGAIQATIYGLCVERDWSQWKLGWNIRLLTVAYSGIVGSGLVFIVIAWCIHMRGPLFASVFNPLMLVLVAVAASLMLNENLYLGSVVGAVMIVCGLYMVLWGKRKEMKNMTQLVPSEIIKKTEVIEVVVRSTPIINNDKYDYNNHNQTNSIKNVYKDLDYMPRNEEKYDIHNKEINEVIS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1063 407 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Lan19g1063 407 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020|GO:0016021
Lan19g1063 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 332 - -
Lan19g1063 407 PANTHER WAT1-RELATED PROTEIN 12 363 - -
Lan19g1063 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Lan19g1063 407 PANTHER WAT1-RELATED PROTEIN 12 363 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1063 Lan-Chr19 17785868 17789149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1063 11 376 Nodulin-like Gene Family AT1G25270 41.803 1.84e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1063 - - gmx:100798755 573.548