Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1062 ATGATCATGATGAAGAGTATGAGAAACTTGGTGCATGGGTTGAAGCCAGCCCTACTAATGGTGTTGGTGCAAATAGCAAATGCTTGGGTCAATGTCATGTACAAGCTTGCGGTCAATGATGGCATGAGCTTGAGGGTTGTTGTTGCTTACCGCTATATTTTTGCAACTGCTTTCATAGCTCCACTTGCTTTCATTCTTGAAAGGAAGAAGAGGCCAAAGATGAGTTGGACAATACTTTTTCAGGCATTTCTGTGTGGCTTATTTGGTGGAGCATTGCCTCAAAACTTACACATGGAAGCACTCGCCTTAACATCTGTAACGTTCACAACCGCCGTATCGAACCTCATTCCAGCCATCACTTTTATTTTGTCCCTCTTATTCCGTTTGGAAACATTAAATTTGAGAGCAGCAGGAGGGAGGGCGAAGATGATTGGAACAATAATTGGAATAGGTGGTGCAATGGTACTAACTTTCATTAAAGGTGTCGAAATTAAAATGTTGTCCTTTCACATAAACCTCTTCAATCATAAAAACAACCATGTTGTACACCCACAAGCTAGTTCCCATGCCATGTTCATCTTAGGTGCTTTCTCCTCTTTTGCCAGCAACATCTCTTATGCTCTTTGGCTCATCATTCAGGCAAAGATGAGTCAAAGATATCCATGTCCTTATTCAAGTACAGCATTGATGTCTCTAATGGGAGCACTCTTATCCATTACTTTTACTTTTATCCTTGAGAGGGATTTGAGTCAGTGGAGATTGGGGTGGAATGTTAGGCTAATAACCGTAGCTTATGCGGGAATAGTTGTTTCTGGAATAATGGTGGCTGCGATTTCATGGTGTGTACGCACGAGAGGCCCATTGTTTGTCTCTGTTTTTAGCCCTCTAATGCTTGTTGTTGTGGCATTTGCTGGATCCACGATTTTAGATGAAAAACTATATCTTGGAAGCATCATTGGATCAGTGTTAATTGTTTGTGGCTTATACATAGTTCTATGGGGTAAAAGCAAAGAGATGAGGAAGAATATTCAATCTGTTTCACCAAATGGCCATCATGATTTCAAAACAGTGGAAATAATTGTGAAGTCTCAAGTTTTAGATAATGCAAATCATGAGAATTACAATACCCTCAATAATATTGGTGGAAAAGAAGTGATATCTCGGAATACATGCTTAAATACTTAA 1185 0.3975 MIMMKSMRNLVHGLKPALLMVLVQIANAWVNVMYKLAVNDGMSLRVVVAYRYIFATAFIAPLAFILERKKRPKMSWTILFQAFLCGLFGGALPQNLHMEALALTSVTFTTAVSNLIPAITFILSLLFRLETLNLRAAGGRAKMIGTIIGIGGAMVLTFIKGVEIKMLSFHINLFNHKNNHVVHPQASSHAMFILGAFSSFASNISYALWLIIQAKMSQRYPCPYSSTALMSLMGALLSITFTFILERDLSQWRLGWNVRLITVAYAGIVVSGIMVAAISWCVRTRGPLFVSVFSPLMLVVVAFAGSTILDEKLYLGSIIGSVLIVCGLYIVLWGKSKEMRKNIQSVSPNGHHDFKTVEIIVKSQVLDNANHENYNTLNNIGGKEVISRNTCLNT* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1062 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 337 - -
Lan19g1062 394 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020|GO:0016021
Lan19g1062 394 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Lan19g1062 394 PANTHER WAT1-RELATED PROTEIN 14 368 - -
Lan19g1062 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Lan19g1062 394 PANTHER WAT1-RELATED PROTEIN 14 368 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1062 Lan-Chr19 17775900 17780763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1062 4 349 Nodulin-like Gene Family AT1G68170 46.532 3.22e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1062 - - gmx:100788378 578.17