Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1061 ATGCTAGGATCAATGGAGATTAAAAATATTTGGAATGTAGTGCATGGGTTGAAGGCAGTGTTGTTAATGGTAATGGTGCAAATAGCATTTGGTGGGGTCAATGTGCTCTATAAGCTAGCCGTAAATGATGGCATGGATTTGAGGGTTGTTGTTGCATATCGCTTAGTATTCGCTACTTCTTTCATAGCTCCACTTGCTCTCATTCTTGAAAGGAAGAAGAGAGCAAAGATGACATGGATGATACTATTTCAATCGTTTTTGTGCGGCTTATTTGGGGGAGCATTGGCTCAAAACTTCTACTTGGAGGCATTGGCTCTAACTTCTGCAACATTTGCATCAGCCATGGCCAATCTCATACCAGCCCTCACTTTTATCATGGCTGTTTCCTTTGGTTTGGAAAGATTAAATTTGAGAACAAGAGGAGGAAAGGGTAAAATAGTGGGTACATTAACTGGAATAGGTGGAGCAATGGTACTAACTTTTGTTAAAGGTGTGGAAATCAATATGAGGCATGTAAACCTTTTGCATCACTCAAATGGTGTTCATGAAGAACACTCTAGCTCTGGTGGTAAATCTGCAATAGGTGCTCTATGTGCCCTTGCTAGTGGAATTTCTTATGCCCTATGGCTCATTATTCAGGCAAAAATGAGTGAAAAATATCCAAGTCATTATTCAAGCACTGCATTGATGTCTCTATGGGGATCACTGATTTCCATTGTGTTTGCTCTTTCCCTTGAAAGGGATTGGACTCAATGGAGGTTGGGTTGGAATATTCGTCTTCTAACTGTTGCATATTCGGGTATAGTGGTTTCTGGAGTCATGGTGACTGTGATTTCTTGGTGCATACGCATGAGAGGACCATTATTTGCTTCTGTTTTTAGCCCTCTAATGCTTGTTATTGTGGCTTTGGCTGGTTGCACCTTGTTGAATGAGAAGCTACATCTTGGAAGCATCATTGGAGCAGTGTTGATAGTGTGTGGCTTATACTTGGTTCTATGGGGTAAAAGTCAAGAGATAAAGAAGATGAATCAATTAGTGCCATCACAAAGCCCTCACCAATCTGACACAGTCGACATCATCGTATTAGAAGATAAAAGCAATCACAATAACAACAATACACACCATGATAATGATGCAAATGTAGTTAGGAATAATCAAAATTTATCCCAAAATGTGACACAAAATAATGAAGAGCATGTCACACAAAACTAA 1212 0.3969 MLGSMEIKNIWNVVHGLKAVLLMVMVQIAFGGVNVLYKLAVNDGMDLRVVVAYRLVFATSFIAPLALILERKKRAKMTWMILFQSFLCGLFGGALAQNFYLEALALTSATFASAMANLIPALTFIMAVSFGLERLNLRTRGGKGKIVGTLTGIGGAMVLTFVKGVEINMRHVNLLHHSNGVHEEHSSSGGKSAIGALCALASGISYALWLIIQAKMSEKYPSHYSSTALMSLWGSLISIVFALSLERDWTQWRLGWNIRLLTVAYSGIVVSGVMVTVISWCIRMRGPLFASVFSPLMLVIVALAGCTLLNEKLHLGSIIGAVLIVCGLYLVLWGKSQEIKKMNQLVPSQSPHQSDTVDIIVLEDKSNHNNNNTHHDNDANVVRNNQNLSQNVTQNNEEHVTQN* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1061 403 PANTHER WAT1-RELATED PROTEIN 17 370 - -
Lan19g1061 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 336 - -
Lan19g1061 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Lan19g1061 403 PANTHER WAT1-RELATED PROTEIN 17 370 IPR030184 GO:0016021|GO:0022857
Lan19g1061 403 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Lan19g1061 403 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1061 Lan-Chr19 17761690 17771187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1061 17 384 Nodulin-like Gene Family AT1G25270 44.474 1.00e-98 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1061 - - gmx:100787839 551.206