Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1054 ATGGGGTTCTTTCTTTTGTGTCTCTTATTAATCTTAATGGGTTGTTTTTGTGAGAGTCAAAATCTTGAAGTTGGGTTCTACTCAAACACATGTCCTCAAGCTGAAACCATTGTTCATAATGTTGTTAAAAGTGCTGTCATTTCTGACCAAAACATGGCTGCTGTATTGCTCAGACTTCATTTTCATGATTGTTTTGTTGAGGGATGTGATGGTTCAATTCTGATAGATAATGGAGATATTTCAGAGAAAAAAGCATTTGGGCATCAAGGGGTTAGAGGATTTGATGTGATAGAAAGAGCCAAGGCTCAATTAGAAGCTTCTTGCCCTGGTGTGGTTTCTTGTGCTGACATAGTTGCATTGGCAGCAAGAGATGCCATAGTCATGGCAAATGGGCCAATGTACCAAGTTCCAACTGGAAGGAGAGATGGATTGGTGTCAAATATTACACTAGCAAATGCCATGCCAGATGTTAGTGATTCAATTGGGCTACTCAGTGAGAAGTTTATCAACAAAGGCCTCACACAGAAAGACCTTGTCCTTCTTAGTGGAGCTCATACAATTGGAACCACAGCATGCTTTTTCATGACCAGAAGACTATACCATTTTTTCCCAAGTGGTAGTGGAACAGACCCAGCTATAAGCCCAACATTGCTCCCAAAGCTTAGGGCAAGGTGCCCTAAGAATGGAGATATTAATGTCCGAATTGCAATGGATGAAGGGAGTGAGAACAAATTTGACAAACACATTTTCAAAAACATAAGACAAAATTTTGCTGTGCTAGAATCTGATGCTAGACTTAATGATGATATTGTGACCAAATCTGTTATAGAGTCTTATTTTAATAACCCAATTTTTGGGCCTTCTTTTGAAGCTGATTTTGTTGAGTCCATTGTGAAGATGGGTCAAATTGGAGTCAAAACTGGTTTCATTGGAGAGATTAGGCACAAGTGTTCAAAGTTCAATTAA 966 0.3903 MGFFLLCLLLILMGCFCESQNLEVGFYSNTCPQAETIVHNVVKSAVISDQNMAAVLLRLHFHDCFVEGCDGSILIDNGDISEKKAFGHQGVRGFDVIERAKAQLEASCPGVVSCADIVALAARDAIVMANGPMYQVPTGRRDGLVSNITLANAMPDVSDSIGLLSEKFINKGLTQKDLVLLSGAHTIGTTACFFMTRRLYHFFPSGSGTDPAISPTLLPKLRARCPKNGDINVRIAMDEGSENKFDKHIFKNIRQNFAVLESDARLNDDIVTKSVIESYFNNPIFGPSFEADFVESIVKMGQIGVKTGFIGEIRHKCSKFN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1054 321 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 ProSiteProfiles Plant heme peroxidase family profile. 21 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 Gene3D - 25 321 - -
Lan19g1054 321 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Lan19g1054 321 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PANTHER PEROXIDASE 25-RELATED 13 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 SUPERFAMILY Heme-dependent peroxidases 21 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 PANTHER PEROXIDASE 13 319 - -
Lan19g1054 321 Pfam Peroxidase 39 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan19g1054 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Lan19g1054 321 Gene3D Peroxidase, domain 2 155 300 - -
Lan19g1054 321 CDD secretory_peroxidase 21 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1054 Lan-Chr19 17716109 17720375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1054 1 321 Peroxidase AT1G77100 54.012 3.00e-111 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1054 K00430 - gmx:100786233 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0757 4 9707436 9709863 Lan19g1054 19 17716109 17720375 LSH