Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1047 ATGAGTCAGCGTATAAGCGACGAGGCTGTGGCGGGGGAACCAAGAAGCGAACATTCTTCGCGTAGATATGGCAATGTATTGCCTCATAATCACAAGGTTGAAGCTCCTCCTAAGAAGACTCTTTTTGAAGATATCAAACAATCTGTGAAGGAAGTTTTCTTCTCAGACAACCCTGCAAAGGAATTTAAGGACAAAACCATAGGAAGAAAGTTTGTTCTAGGCCTCGAATCGGTTTTCCCGATTTTAAATTGGGCTAAAGGTTACAACTTTAAATCATTCCGAGGTGATTTCATTTCTGGACTTACCATTGCAAGTCTTTGTATTCCACAGGACATTGCATATGCAAAGCTTGCAAATTTGGATCCTCAATATGGATTATATACTAGTTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATCGCGATAGGACCAGTAGCCGTGGTGTCCCTCTTGCTAGGGACTATGCTTTCCAATGAGATTGCGGACATCCATAGTCATGATTACCTACGCCTCGCTTTTACGGCTACCTTCTTTGCAGGAATTACTCAAATAGGACTAGGAGTTTTAAGGCTTGGTTTCTTGATTGACTTTCTATCTCATGCGGCCATCGTCGGATTCATGGCCGGAGCAGCCGTTACTATTGCGCTGCAACAGCTTAAAGGTTTGCTTGGCATAGTGAACTTTACTAAGAAAACTGACATTGTTTCTGTGATGAGGTCAGTTTGGGGTACAGTGCACCATGGGTGGAATTGGGAAACAATAGTGATTGGAGTATCATTCTTGACTTACCTTCTAGTAACCAAGTATATTGCTAAAAAGAGAAAGAAACTCTTTTGGGTGGCTGCAATTGCTCCTATGATCTCTGTCATATTGTCTACACTTTTTGTGTACATTACCAGGGCCGACAAGAAAGGCGTTGCGATCGTGAAACACATTAAAAAAGGTGTGAATCCAGCATCGGCTAGTGAAATATTTTTCAGTGGAAAATATTTGGGTGCGGGTGCTCGGATCGGTTTGATAGCTGGCCTGATAGCACTAACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATCCACTTGATGGTAATAAAGAAATGGTGGCTCTAGGAACAATGAACATTGTTGGTTCACTCACATCATGTTATGTAGCTACAGGATCATTTTCTCGAACAGCCGTAAACTATATGGCTGGTTGTAAAACCGCTGTATCAAACATCGTTATGTCCATCGTTGTACTGCTAACTCTATTAGTCATTACACCATTGTTTAAGTATACACCAAATGCAGTCCTGGCTGCTATTATAATAACTGCCGTGATAGGCCTTATCGACATTGAAGCTGTAATTCTGCTTTGGAAGATTGACAAATTCGACTTTGTAGCTTGCCTTGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGTTGAAATCGGCCTTCTAATTGCGGTTATAATATCTTTTGCTAAAATCCTTTTACAAGTGACAAGGCCAAGGACTATAGTACTCGGGAAGCTTCAAGGGACTAGTGTTTATCGAAACATCCATCAATACCCGAAAGCATCTCAAATTCCAGGCATGCTGATTATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGGTGACTGATGAAGATGTCCAAAGGACAGGAAGTGAAATGCCGAGAATACAGTATCTCATCATCGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATCCATGCCCTTGTGGAGTTATTTAAGAGCCTTCAGAAAAGGGATATACAGCTTTTGTTGGCAAATCCGGGACCAATTGTGATGGAGAAGCTCAGTGCATCAAATTTAACTCACTTAATTGGAGAACATAAAATATTTCTATCAGTGGCTGATGCTGTTGCAACTTTTGGTGCATAG 1950 0.4149 MSQRISDEAVAGEPRSEHSSRRYGNVLPHNHKVEAPPKKTLFEDIKQSVKEVFFSDNPAKEFKDKTIGRKFVLGLESVFPILNWAKGYNFKSFRGDFISGLTIASLCIPQDIAYAKLANLDPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTMLSNEIADIHSHDYLRLAFTATFFAGITQIGLGVLRLGFLIDFLSHAAIVGFMAGAAVTIALQQLKGLLGIVNFTKKTDIVSVMRSVWGTVHHGWNWETIVIGVSFLTYLLVTKYIAKKRKKLFWVAAIAPMISVILSTLFVYITRADKKGVAIVKHIKKGVNPASASEIFFSGKYLGAGARIGLIAGLIALTEAVAIGRTFAAMKDYPLDGNKEMVALGTMNIVGSLTSCYVATGSFSRTAVNYMAGCKTAVSNIVMSIVVLLTLLVITPLFKYTPNAVLAAIIITAVIGLIDIEAVILLWKIDKFDFVACLGAFFGVIFKSVEIGLLIAVIISFAKILLQVTRPRTIVLGKLQGTSVYRNIHQYPKASQIPGMLIIRVDSAIYFSNSNYIKERILRWVTDEDVQRTGSEMPRIQYLIIEMSPVTDIDTSGIHALVELFKSLQKRDIQLLLANPGPIVMEKLSASNLTHLIGEHKIFLSVADAVATFGA* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1047 649 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Lan19g1047 649 PANTHER SULFATE TRANSPORTER 16 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan19g1047 649 Pfam STAS domain 525 643 IPR002645 -
Lan19g1047 649 Gene3D STAS domain 504 648 IPR036513 -
Lan19g1047 649 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 16 648 - -
Lan19g1047 649 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Lan19g1047 649 Pfam Sulfate permease family 93 472 IPR011547 GO:0016021
Lan19g1047 649 SUPERFAMILY SpoIIaa-like 526 647 IPR036513 -
Lan19g1047 649 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Lan19g1047 649 MobiDBLite consensus disorder prediction 10 29 - -
Lan19g1047 649 TIGRFAM sulP: sulfate permease 80 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan19g1047 649 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1047 Lan-Chr19 17678342 17681632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1047 17 644 Inorganic Solute Cotransporters AT1G22150 70.747 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1047 K17470 - gmx:100784124 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1047 19 17678342 17681632 Lan16g0053 16 296404 300450 LSH