Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1046 ATGGATGCTTTATTCTTAAGCTCAAGCAATAGCATTTCCAAGCCAATGTTTCATAACCTTAGACTCTCATCAAATAACCAAAAACGTTTTTCTCCTATGCCATTTTCTGTTTCATGCAGATCCACAACAAAGACTATTACTCATACTAATACTACCAACAACTTCTACAACATGCTCTCTTTGTGTCCCAAAAGTGCAACCATGGATGACATAAAGAAAGCTTATAGGTCAATGGCACTTAGGTACCACCCTGATGTGTGCCATGATGTTACAAAGAAAGAAGAATCAACTAGGATGTTTGTGCAACTCAATGCAGCTTATAATACTTTGTCCAATCCAAAGCTTAGAGCTGAGTATGATTCTGAGTTATTGGGTTATAGAGGACAAAGAAGTACTAGTTTTGGTGATGAATATGAGAGTTGGAGATGTAAGTGGCAAGAACAAATGGTTGAGTTGAAGAGAAAGTGTCATAGAGGTGTGGCACAAAAGGAGGGATCATGGGGTAGTAGAATGAGAGCAAAAAACATGAATATGAATTATCAAAACTTATGA 552 0.3714 MDALFLSSSNSISKPMFHNLRLSSNNQKRFSPMPFSVSCRSTTKTITHTNTTNNFYNMLSLCPKSATMDDIKKAYRSMALRYHPDVCHDVTKKEESTRMFVQLNAAYNTLSNPKLRAEYDSELLGYRGQRSTSFGDEYESWRCKWQEQMVELKRKCHRGVAQKEGSWGSRMRAKNMNMNYQNL* 184
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1046 183 Pfam DnaJ domain 54 120 IPR001623 -
Lan19g1046 183 PRINTS DnaJ domain signature 57 75 IPR001623 -
Lan19g1046 183 PRINTS DnaJ domain signature 75 90 IPR001623 -
Lan19g1046 183 PRINTS DnaJ domain signature 95 115 IPR001623 -
Lan19g1046 183 ProSiteProfiles dnaJ domain profile. 54 123 IPR001623 -
Lan19g1046 183 CDD DnaJ 55 112 IPR001623 -
Lan19g1046 183 ProSitePatterns Nt-dnaJ domain signature. 100 119 IPR018253 -
Lan19g1046 183 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 4 178 - -
Lan19g1046 183 SUPERFAMILY Chaperone J-domain 45 124 IPR036869 -
Lan19g1046 183 Gene3D DnaJ domain 40 150 IPR036869 -
Lan19g1046 183 SMART dnaj_3 53 115 IPR001623 -
Lan19g1046 183 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 4 178 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan19g1046 Lan-Chr19 17673068 17673699 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1046 56 121 C2H2 Transcription Factor Family AT1G74250 39.706 3.35e-07 47.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0752 4 9690248 9690919 Lan19g1046 19 17673068 17673699 LSH