Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan19g1046 | ATGGATGCTTTATTCTTAAGCTCAAGCAATAGCATTTCCAAGCCAATGTTTCATAACCTTAGACTCTCATCAAATAACCAAAAACGTTTTTCTCCTATGCCATTTTCTGTTTCATGCAGATCCACAACAAAGACTATTACTCATACTAATACTACCAACAACTTCTACAACATGCTCTCTTTGTGTCCCAAAAGTGCAACCATGGATGACATAAAGAAAGCTTATAGGTCAATGGCACTTAGGTACCACCCTGATGTGTGCCATGATGTTACAAAGAAAGAAGAATCAACTAGGATGTTTGTGCAACTCAATGCAGCTTATAATACTTTGTCCAATCCAAAGCTTAGAGCTGAGTATGATTCTGAGTTATTGGGTTATAGAGGACAAAGAAGTACTAGTTTTGGTGATGAATATGAGAGTTGGAGATGTAAGTGGCAAGAACAAATGGTTGAGTTGAAGAGAAAGTGTCATAGAGGTGTGGCACAAAAGGAGGGATCATGGGGTAGTAGAATGAGAGCAAAAAACATGAATATGAATTATCAAAACTTATGA | 552 | 0.3714 | MDALFLSSSNSISKPMFHNLRLSSNNQKRFSPMPFSVSCRSTTKTITHTNTTNNFYNMLSLCPKSATMDDIKKAYRSMALRYHPDVCHDVTKKEESTRMFVQLNAAYNTLSNPKLRAEYDSELLGYRGQRSTSFGDEYESWRCKWQEQMVELKRKCHRGVAQKEGSWGSRMRAKNMNMNYQNL* | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan19g1046 | 183 | Pfam | DnaJ domain | 54 | 120 | IPR001623 | - | |
Lan19g1046 | 183 | PRINTS | DnaJ domain signature | 57 | 75 | IPR001623 | - | |
Lan19g1046 | 183 | PRINTS | DnaJ domain signature | 75 | 90 | IPR001623 | - | |
Lan19g1046 | 183 | PRINTS | DnaJ domain signature | 95 | 115 | IPR001623 | - | |
Lan19g1046 | 183 | ProSiteProfiles | dnaJ domain profile. | 54 | 123 | IPR001623 | - | |
Lan19g1046 | 183 | CDD | DnaJ | 55 | 112 | IPR001623 | - | |
Lan19g1046 | 183 | ProSitePatterns | Nt-dnaJ domain signature. | 100 | 119 | IPR018253 | - | |
Lan19g1046 | 183 | PANTHER | CHAPERONE DNAJ DOMAIN PROTEIN | 4 | 178 | - | - | |
Lan19g1046 | 183 | SUPERFAMILY | Chaperone J-domain | 45 | 124 | IPR036869 | - | |
Lan19g1046 | 183 | Gene3D | DnaJ domain | 40 | 150 | IPR036869 | - | |
Lan19g1046 | 183 | SMART | dnaj_3 | 53 | 115 | IPR001623 | - | |
Lan19g1046 | 183 | PANTHER | CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC | 4 | 178 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan19g1046 | Lan-Chr19 | 17673068 | 17673699 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan19g1046 | 56 | 121 | C2H2 Transcription Factor Family | AT1G74250 | 39.706 | 3.35e-07 | 47.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan4g0752 | 4 | 9690248 | 9690919 | Lan19g1046 | 19 | 17673068 | 17673699 | LSH |